Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq105 89.7 3e-13 seq1988 87.8 1e-12 >seq105 Length=629 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||| || |||||||| || |||||||| | || || || || | Sbjct 152 ATGCAAATCTTCGTTAAGACTCTCACGGGCAAGACGATCACCTTGGAGGTCGAGTCGTCC 211 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || | || | | ||||| || || | || |||||||| Sbjct 212 GACACTATTGACAATGTGAAGGCGAAGA-TCCAAGACAAGGAGGGCATTCCCCCAGATCA 270 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || || || || || || || | || ||| | |||||||| Sbjct 271 ACAACGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACTCTCTCTGATTACAA 330 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 331 CATCCAGAAGGAGTCTAC 348 >seq1988 Length=7662 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || | || ||||| || |||||||| || || || || | Sbjct 4087 AATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATCACTCTTGAGGTCGAGTCGTC 4146 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || ||| || ||||| || ||| | |||||||| || Sbjct 4147 TGACACGATCGACAACGTCAAGGCAAAGATCCAGGACAAGGAGGGTATTCCGCCAGACCA 4206 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || ||||| || || || || | ||||| | ||||||||| Sbjct 4207 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCTCCGATTACAA 4266 Query 23790 CATACAAAAAGAG 23802 ||| || || ||| Sbjct 4267 CATCCAGAAGGAG 4279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337966967377292