Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq105 165 2e-35 seq1988 154 4e-32 seq4143 125 2e-23 seq4155 104 6e-17 seq2768 102 2e-16 >seq105 Length=629 Score = 165 bits (182), Expect = 2e-35 Identities = 169/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| ||||| || || || || || |||| |||||||| | | ||| Sbjct 372 CGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTC 313 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||| ||||||||||| || |||||||| || || ||||| || Sbjct 312 CGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCC 253 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||||||| || || ||||| || | || || || || Sbjct 252 TCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAAG 193 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||||||||| | ||| || | ||| | |||||| Sbjct 192 GTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 Score = 111 bits (122), Expect = 4e-19 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| || || || ||||| | ||||| |||| | || | |||||||| | Sbjct 587 CAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGA 528 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 | ||||| ||||||||||| || ||||| |||||||| || || |||||||||||||||| Sbjct 527 GTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGA 468 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 | || |||||| || || ||||| || | || || || ||||| || || || | Sbjct 467 TTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCC 408 Query 225686 CCGT 225689 | || Sbjct 407 CTGT 404 >seq1988 Length=7662 Score = 154 bits (170), Expect = 4e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||| ||||| ||| || || |||| ||||||||| | | ||| | |||||||| | Sbjct 3782 CAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGA 3723 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| || |||||||| || || || |||||||| |||||||| ||||||||||||| Sbjct 3722 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGA 3663 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 ||||| ||| || || ||||| || |||| || || || | |||||| ||||||| Sbjct 3662 TCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGC 3603 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | |||| || |||| ||| | ||||| Sbjct 3602 CAGTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||||||||| || || || || |||| ||||||||| | || || | ||||| || | Sbjct 4577 CAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAA 4518 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 | ||||| || || ||||| || ||||||||||| || ||||| || ||||||||||| | Sbjct 4517 GTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 4458 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 ||||| ||| ||| |||||||| || || | || || || | ||||| ||||||| Sbjct 4457 TCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGC 4398 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | |||||||| || | ||| | ||||| Sbjct 4397 CGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || || || | ||||| || | | ||| | || || Sbjct 4867 AGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTACGACCGTCC 4808 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| ||||| ||||||||||| || ||||| |||||||| Sbjct 4807 TCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGGATACCCTCCTTGTCC 4748 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 4747 TGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTC 4688 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || || | ||| | |||||| Sbjct 4687 TTACCCGTCAACGTCTTGACGAAGATTTGCAT 4656 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| || || || || |||| |||||||||| | || | ||||| || | Sbjct 4295 CAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAA 4236 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||| ||||||||||| || || || ||||| ||||||||||| |||||||| |||| Sbjct 4235 GCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGA 4176 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 ||||| ||| || ||||| ||||| || | || || || | ||||| ||||| | Sbjct 4175 TCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTC 4116 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCATT 225714 | |||||||| || | ||| | |||||| Sbjct 4115 CGGTCAAAGTCTTGACGAAGATCTGCATT 4087 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||| || || || | ||||| || | | || | ||||| Sbjct 4071 AGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGGCCATCC 4012 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | ||||| ||||| || ||||| || |||||||| Sbjct 4011 TCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 3952 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| |||| || || || | ||||||||| Sbjct 3951 TGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACTTCGAGGGTGATCGTC 3892 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | ||| | ||||| Sbjct 3891 TTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 >seq4143 Length=9267 Score = 125 bits (138), Expect = 2e-23 Identities = 158/214 (74%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTA 7559 || || ||||||||| ||||||| ||| ||| ||| || || |||| ||| | || Sbjct 5257 ATTAGATTAGAATTATCTGCTCCAGGTGTACAA-TATATAGCTGATAAT---CAATTATA 5312 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || |||||| || || ||||| | | ||||| || ||| | |||||||| | | | Sbjct 5313 TAATAGTATTATAACAGCTCATGCTATATTAATGATATTTTTTATGGTTATGCCAGCTTT 5372 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || ||||| || |||| || | |||||| | |||| | ||||||||||||||| Sbjct 5373 AATTGGAGGTTTTGGTAATTTCTTATTACCTTTATTAGTTGGAGGTCCTGATATGGCTTT 5432 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 |||||| | || |||||||||||||||||| || Sbjct 5433 TCCAAGATTAAATAATATAAGTTTTTGATTATTA 5466 Score = 107 bits (118), Expect = 5e-18 Identities = 87/104 (84%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| ||||||||||||||||||||||| || | |||||||| ||||| || | Sbjct 5877 TTCAGGATGTCCAAAAAATCAGAATAAATGTTGGTATAATATAGGATCACCTCCACCAGC 5818 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 | |||||||| ||||||||||||||||||||||| |||| Sbjct 5817 TAATTCAAAAAAAGATGTATTAAAATTTCTATCAGTTAATAACA 5774 >seq4155 Length=6849 Score = 104 bits (114), Expect = 6e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| ||||| || | ||||| || | || || || || || Sbjct 91 AGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTCCTGCCGTCC 150 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||| ||||||||||| || ||||||||||| |||||||| Sbjct 151 TCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGGTCAGGCGGAAT 197 >seq2768 Length=3315 Score = 102 bits (112), Expect = 2e-16 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || || || || || |||| |||||| || |||||| || ||||| Sbjct 2819 AGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCACTCAAAGTCCTGCCATCC 2878 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || |||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct 2879 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGTTGATCGGGCGGAATAC 2927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192373074462206