Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2980 172 8e-38 >seq2980 Length=15283 Score = 172 bits (190), Expect = 8e-38 Identities = 384/566 (68%), Gaps = 18/566 (3%) Strand=Plus/Plus Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 ||||| ||||||||| ||| | || || |||||||| || | || || || | || Sbjct 11960 AAACAAGCAAAATCAGTATGCAACCCCTCGTCTCTACTGATCAGCTCATTCGAGTACGTC 12019 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 || || ||||| || || | |||||| | |||||| || ||||||||| | ||||||||| Sbjct 12020 AGTCCTGGCATGAGGCCCCTCTTTTTCAACCAAAAAATCGCCGCGAAACAGCCAGAAAAG 12079 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCAT--TAT 46804 |||||||||||||| || || || ||||| || | ||| || | | | | | | | Sbjct 12080 AATATGCCTTCTACCGCTGCAAAGGCGACGAGACGTTCTGCGAACGTAGACTGTTGATCT 12139 Query 46805 GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCA 46863 || ||||||| ||||||| || ||||| |||| | ||| || || || || ||||| Sbjct 12140 GATATCCACCGAAGAGCCCACTCGGCCTTCTTCTGGATACAGGGAATAGTCTCGATAGCG 12199 Query 46864 TTAAAGAGAAAGtttt----tttCATCACTATCTTTAACATATGTATCTATTAAAAGACT 46919 | || |||| || | | | || |||| | || ||||| || | || Sbjct 12200 T---CGAATAAGTATTCTCGCTGCTTGAC-GTCTTGGATGTAGGTATCAATGAGGAGGGA 12255 Query 46920 ATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 46979 ||| | |||||||| ||||| || || || || || ||||| || || | ||||| Sbjct 12256 GTACGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAGCAACGAGCTTC 12315 Query 46980 AGTAATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTCCATCAC 47038 || ||| ||||| | | |||||||| ||| | ||||| || || || ||||| Sbjct 12316 AGCTGCCTGCACCTCGTTCGAGAATCGTTC-GACGAGGTTCTCGTTGACGATCCCATCGG 12374 Query 47039 TAGCAGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCGGT-AGTCAGT 47094 |||| || || || | ||| || || |||| || | |||| | || | | Sbjct 12375 AGCCAGCGAAGAAGGCGAGTACGTGCGAGATGAAATGACGTTCGTTATCGTTCAGAC-GG 12433 Query 47095 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC 47154 | | |||||| | ||| | || | || | ||||| |||||||||||||| ||| Sbjct 12434 GTGTGCCAGTCTACCAGATCGTGCGAGAGGTCGATCTCTTCGGCTGTCCAGAATGAAGCC 12493 Query 47155 TCTGCTTTTTTATACATATTCCATAT 47180 ||||| ||||||||||| | ||| || Sbjct 12494 TCTGCCTTTTTATACATTTGCCAAAT 12519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712842173023680