Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq6240 82.4 2e-11 >seq6240 Length=1697 Score = 82.4 bits (90), Expect = 2e-11 Identities = 134/187 (72%), Gaps = 11/187 (6%) Strand=Plus/Plus Query 29618 TTCGCTGTACACGACCTGCGCCGCACTGCCAGCACGCTGTTGCATGAAGCTGGCTATCCA 29677 ||| | || ||||||||||||||||| | | ||| || || | | || | | || | Sbjct 1296 TTCACCGTCCACGACCTGCGCCGCACCGGCTCGACGTTGCTGAACG-AGATCGGATTCAA 1354 Query 29678 TC-AGACTGGATTGAAAAGGCGCTGGCGCATGAACAGAAGGGCGT-----GCGTGCGGTG 29731 | |||||||| || ||| |||||||| || || |||||| ||| |||| Sbjct 1355 CCGCGACTGGATCGAGAAGTGCCTGGCGCACGA--GGAGGGGCGTTCCTCGCGGTCGGTC 1412 Query 29732 TACAACAAAGCGGAGTACGCCAGGCAGC-GCGCCTACATGTTGCAGCAGTGGGCGAATAT 29790 |||||||| || ||||||||| ||||| ||||| ||||| |||| |||||||| | | Sbjct 1413 TACAACAAGGCCGAGTACGCCGAGCAGCGGCGCC-ACATGCTGCAACAGTGGGCTCACTT 1471 Query 29791 GGTTGAT 29797 ||| ||| Sbjct 1472 GGTCGAT 1478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133493992322836