Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq8881 96.9 1e-15 >seq8881 Length=1866 Score = 96.9 bits (106), Expect = 1e-15 Identities = 212/312 (68%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 39025 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGTACGCCG 39084 |||| |||| ||||||| ||| || || | ||| ||||||| | || || || | Sbjct 778 ACTCCGCCGTGTAGTGCACCTTGAGCCACCCGGTGTGGTAGGCCAGCAGCGAATAGGCGG 837 Query 39085 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGCCT 39144 | | ||||| |||||||||| |||| || || || | | | || ||| | ||| | | Sbjct 838 CGGCGTGCGACTTGTTGAAGCCGTAACCCGCAAACTTTTCCATCAGGTCGAAGACCTCGT 897 Query 39145 GGA--TGGCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTT--CACGAAC 39200 | | | | | | || || ||| ||| || ||||| ||||| | |||| Sbjct 898 CGGCCTTGTCCTGACTGA-TACCCTTT-TCGGCTGCACCCTTGCGGAAGATGGCACGG-- 953 Query 39201 TCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTGA 39260 | || ||||| |||||| ||| |||||||||||||| ||||| || | |||||| Sbjct 954 TGCTCGGCCATTTCCTCGGCCTTTTTCTTGCCCATGGCGCGGCGCAGCATGTCGGCGCCG 1013 Query 39261 CCCAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGACC 39320 || || ||| ||| | || | ||| |||| || | ||||||||||||||||| | Sbjct 1014 CCGAGCGAGTAACCACCCAGCACCTGCGCCGTCTGCATCACCTGCTCCTGGTAGACCATG 1073 Query 39321 AGCCCGTAGGTC 39332 | ||||||||| Sbjct 1074 ATGCCGTAGGTC 1085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160121119596472