Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq10123 123 2e-23 >seq10123 Length=609 Score = 123 bits (136), Expect = 2e-23 Identities = 238/340 (70%), Gaps = 22/340 (6%) Strand=Plus/Plus Query 47044 AACTGCCACCACAACTACA----CCGAGAACGTCACGATCAACGGCGAGAGGGTGTGGCT 47099 |||||||||||||||||| || ||||||||| || || ||| ||| | Sbjct 155 AACTGCCACCACAACTACGTCAGCCACGAACGTCACT-TCGGCGCCGAC---GTGCTCGT 210 Query 47100 GACGCGCAAGGGTGCG--ATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGGCTCC 47157 ||| |||||||| ||| |||| |||| || ||| || || ||||||||||| | Sbjct 211 GACCCGCAAGGGCGCGGTATCG--GCCAAGGAAGGCGAGCTGGGGATCATCCCCGGCAGC 268 Query 47158 ATGGGCACCAAGTCGTACGTCGTTGTGGGGCAGGGGAATTCGTCTG-GCCTATACTCGGC 47216 |||||| | ||||||| | |||| | | |||| ||| | || | || | | ||| Sbjct 269 ATGGGCGCGAAGTCGTTCATCGT-GCGTGGCAAGGGCAACCGCGAGAGCTTCTGCTCCTG 327 Query 47217 ACCACATGGGGCTGGCCGGAACTTCTCTCGCACCGAGGCTCGCAAGCGGTTCACTGCGGA 47276 | ||||| ||||||||||| | || || | |||||| ||||||| |||||| | || Sbjct 328 CTCGCATGGCGCTGGCCGGAAGATGTCCCGTAACGAGGCGCGCAAGCAGTTCACCGTCGA 387 Query 47277 CGACC---TCGCGAAGGCCATGGAGGGCATCGAGTACCGCCACGGTGAGGAGTG-GATCG 47332 |||| |||| ||| | | || | |||| |||| | | |||| ||| | ||| Sbjct 388 GGACCATATCGC---GGCGACTGCCGGTGTGGAGTGCCGCAAGGACGAGG-GTGTGCTCG 443 Query 47333 ACGAGATCCCCGCAGCGTACAAGGACATCGACCAGGTCAT 47372 |||||| |||||||| ||||||||||||||| ||| || Sbjct 444 ACGAGACGCCCGCAGCCTACAAGGACATCGACGTGGTGAT 483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313870806971733