Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq105 116 9e-21 seq1988 107 4e-18 >seq105 Length=629 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||| ||| ||||| |||||||| |||| | || | |||||||| | Sbjct 587 CAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGA 528 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | |||||||| | | |||||||||||| ||||| | Sbjct 527 GTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGA 468 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | |||| ||| ||| || || | ||||| ||||| | Sbjct 467 TTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCC 408 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| ||||| || |||| ||||||| Sbjct 407 CTGTGAGCGTCTTGACAAAGATCTGCATT 379 Score = 105 bits (116), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| |||||||| || |||||||||||||| | | ||| | ||||| Sbjct 363 AGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTCCGGCCATCC 304 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| || | || || || | | || || ||||| | Sbjct 303 TCGAGCTGCTTT--CCAGCGAAGATGAGACGTTGTTGATCTGGGGGAATGCCCTCCTTGT 246 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || || ||| | || | |||| || ||| || || | || || | Sbjct 245 CTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACCTCCAAGGTGATCG 186 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||||||||| ||||||| ||||| Sbjct 185 TCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 >seq1988 Length=7662 Score = 107 bits (118), Expect = 4e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || ||| ||| || |||||||||||||||| | || | ||||| || | Sbjct 4295 CAAGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAA 4236 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | ||||||||| | || || || ||||| || || | Sbjct 4235 GCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGA 4176 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | |||| || ||| || |||||||| || || || | Sbjct 4175 TCTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTC 4116 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | |||||| ||||||| ||||||| Sbjct 4115 CGGTCAAAGTCTTGACGAAGATCTGCATT 4087 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 ||||||| || || ||| || ||||| |||||||| | | ||| | |||||||| | Sbjct 3782 CAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGA 3723 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | ||||||||| | | || || ||||| ||||| | Sbjct 3722 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGA 3663 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | | | || || ||| || || || || || || |||| Sbjct 3662 TCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGC 3603 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| ||||||| |||||| Sbjct 3602 CAGTCAGGGTCTTTACGAAGATCTGCAT 3575 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || |||||||| || ||||| |||||||| | | || | ||||| || | Sbjct 4577 CAAGGTGGAGGGTAGACTCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAA 4518 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| || | || ||||| | | || || ||||| ||||||| Sbjct 4517 GTTGCTTACCGGCAAAGATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAA 4458 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | | | || ||| ||| || || || || || || |||| Sbjct 4457 TCTTTGCCTTAACATTGTCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGC 4398 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||||||||||| |||||| Sbjct 4397 CGGTCAAAGTCTTCACGAAGATCTGCAT 4370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153667807328179