Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1988 224 2e-53 seq105 161 2e-34 seq2317 109 1e-18 seq4155 98.7 2e-15 seq2768 96.9 7e-15 seq5862 84.2 5e-11 >seq1988 Length=7662 Score = 224 bits (248), Expect = 2e-53 Identities = 186/227 (82%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| || || || | ||||| || || || ||||||||||||| | Sbjct 4086 CCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 4027 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || ||||||||||||||||| |||||| ||| Sbjct 4026 AGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGA 3967 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || || | ||||| ||||| || | |||||| Sbjct 3966 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACT 3907 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 3906 TCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || || || ||||||||||||| Sbjct 4883 ACCACCACGGAGACGGAGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGA 4824 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| ||||| || || || ||||||| || |||||||| || Sbjct 4823 GAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGG 4764 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||||| || || ||| ||||||| ||||| |||| || || Sbjct 4763 GATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCAC 4704 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| |||||||||||||| ||||| ||||| || ||||| Sbjct 4703 CTCGAGGGTGATAGTCTTACCCGTCAACGTCTTGACGAAGATTTGCAT 4656 Score = 183 bits (202), Expect = 6e-41 Identities = 155/191 (81%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| ||||| || | || |||||||||||||| ||||| || ||||||||| Sbjct 4560 TCCTTCTGGATATTGTAATCCGACAGGGTGCGGCCATCCTCAAGTTGCTTACCGGCAAAG 4501 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||||||||||||| ||||| |||||||||||||| |||||||| || || | Sbjct 4500 ATGAGACGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTAACATTG 4441 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || |||| ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct 4440 TCGATGGTATCAGAAGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTCACG 4381 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 4380 AAGATCTGCAT 4370 Score = 179 bits (198), Expect = 8e-40 Identities = 164/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 282894 AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGT 282953 || |||| || || || || ||||||||||| || | || ||||| |||||||| || Sbjct 4293 AGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGC 4234 Query 282954 TGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATC 283013 || || || || ||||| | ||| || ||||| |||||||||||||||||| |||||| Sbjct 4233 TGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATC 4174 Query 283014 TTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073 ||||| || ||| | ||||| ||||| || | ||||| || |||||||| ||||| || Sbjct 4173 TTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCCG 4114 Query 283074 GTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||||||| ||||| ||||||||| Sbjct 4113 GTCAAAGTCTTGACGAAGATCTGCATT 4087 Score = 165 bits (182), Expect = 2e-35 Identities = 164/211 (78%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| |||| | ||||| || || ||||| ||||| || | || ||||||||||| | Sbjct 3785 TACCAAGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTT 3726 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | || || || ||||| ||||| | ||| || ||||| ||||||||||||||||||| Sbjct 3725 CGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTT 3666 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCT 283068 |||||||||| || ||| | || || || || || | ||||| ||||| ||||| |||| Sbjct 3665 GGATCTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCT 3606 Query 283069 TACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || |||| ||||| ||||| |||||||| Sbjct 3605 TGCCAGTCAGGGTCTTTACGAAGATCTGCAT 3575 >seq105 Length=629 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || ||||| || || || | || || || ||||||||||| |||| Sbjct 378 CCTCCTCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 319 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || || || ||||| | ||||||||| || ||| Sbjct 318 AGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGA 259 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||| || || || | || |||||||| || | ||||| Sbjct 258 ATGCCCTCCTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCGACC 199 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||||| ||||| | |||||||||||| || ||||| Sbjct 198 TCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| | || | ||| || || ||||| ||||||||||| | || || || ||||| | Sbjct 590 TACCAAGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTT 531 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | ||||| || || || ||||||| |||||| ||||| || || || |||||||||| Sbjct 530 CGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTT 471 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCT 283068 |||| || || || ||| | || || ||||| |||| ||||| || | || || || | Sbjct 470 GGATTTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTT 411 Query 283069 TACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || || | ||||| || || ||||||||| Sbjct 410 TCCCTGTGAGCGTCTTGACAAAGATCTGCATT 379 >seq2317 Length=22799 Score = 109 bits (120), Expect = 1e-18 Identities = 144/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 ||||| ||||||||||| |||||||||||||||||||| | | ||| |||||| Sbjct 6392 GTGAAGATGTACCTGGCCGCGGCATGGTCCTTGCCACCTTGGTCGCGGGTACCGAACTGA 6451 Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACG 273899 || | ||||| ||| |||| |||||||| ||||||||| | ||||| |||| || | | Sbjct 6452 CCGTTTGGCAGGAGCAAGTTAATGTTGTTACTACCGACGAAGTCCTGGGCCAAGTTGATG 6511 Query 273900 ATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATA-GGCGCTGTGTTCGGCGATATAACC 273958 || ||| | | | |||||||||||| || | ||| | ||||| ||| ||||| Sbjct 6512 ATCGTCATCATCAAACTTTGCTCGCCGTGGTGGTATTGGGCT-TTTTCGGAGATGTAACC 6570 Query 273959 ACTGAACTGAGCAACCT 273975 | | ||||| |||| Sbjct 6571 AACCAGTTGAGCGACCT 6587 >seq4155 Length=6849 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||| ||||| || || || | || || |||||||| | || || ||| Sbjct 256 CCCTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 315 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| || || | |||||||||||| |||||||| Sbjct 316 AGAGTGATGGTCTTTCCAGTAAGAGTCTTAACGAAGATCTGCAT 359 >seq2768 Length=3315 Score = 96.9 bits (106), Expect = 7e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| ||||| || | ||||| ||||| |||| || || || Sbjct 2991 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCA 3050 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || ||||| ||||| ||||| | ||||| ||||| |||||||| ||| Sbjct 3051 AGGGTGATGGTCTTCCCCGTAAGGGTCTTGACGAAGATCTGCATCTTC 3098 >seq5862 Length=4026 Score = 84.2 bits (92), Expect = 5e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| | ||||||| ||| ||| |||| ||||| | ||||||||||||||| Sbjct 833 TAACGCCAGAGCATGTACTCGAGGGGAGTCTTGTCGAGATGCTGATCGATGTGGTGGAAA 892 Query 316243 GCGTGCTGTGCCACGTAAGC-AAGACGCATATTTGGATGCTTCCA 316286 ||||||||||| |||||| | | ||| || || || |||||||| Sbjct 893 GCGTGCTGTGCGACGTAACCGATGAC-CAAGTTGGGGTGCTTCCA 936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046600405980246