Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lentinus_20polychrous_20[genbank_20GCA_5F000787475.1_202014-11-26] 10,349 sequences; 38,054,542 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1988 158 1e-33 seq105 136 4e-27 seq4155 87.8 2e-12 >seq1988 Length=7662 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||||||||||| ||||| ||| Sbjct 4882 CCACCACGGAGACGGAGGACAAGGTGGAGCGTACTCTCCTTCTGAATGTTGTAGTCAGAG 4823 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||| |||||||| ||||| ||||| ||||||||||| | || Sbjct 4822 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGAGGG 4763 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | ||| | | |||||| |||||||| Sbjct 4762 ATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCCAC 4704 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || |||||||||| |||||| ||||| || |||||| Sbjct 4703 CTCGAGGGTGATAGTCTTACCCGTCAACGTCTTGACGAAGATTTGCATG 4655 Score = 145 bits (160), Expect = 7e-30 Identities = 164/216 (76%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| || |||||||||||||| || || || || ||||| ||||| | || |||||| Sbjct 3780 AGATGGAGGGTGCTCTCCTTCTGGATATTGTAATCCGAGAGAGTGCGGCCATCTTCGAGC 3721 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||||||||| || || ||||| ||||| | |||| | |||||||| | || | Sbjct 3720 TGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGT-CTTGGAT 3662 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 ||||| | ||| | | | || ||| ||||| ||||| | ||| || || || || Sbjct 3661 CTTTGCCTTGACGTTGTCAATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCC 3602 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCATG-TTATCGA 41870 ||||| ||||||||||| ||||||||| |||||| Sbjct 3601 AGTCAGGGTCTTTACGAAGATCTGCATGACTATCGA 3566 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || |||||||||||||||||||| ||||| || Sbjct 4086 CCTCCACGCAGACGAAGAACGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 4027 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| || || || |||| || || ||||| | ||| Sbjct 4026 AGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCAGGAGGA 3967 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 3966 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCG--ATCGTGTCAGAGGACTCGA 3909 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || ||||| || ||||||| |||||| ||||| |||||||| Sbjct 3908 CTTCGAGGGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 3860 Score = 132 bits (146), Expect = 4e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || || ||||||||||| ||||| || |||||||||||||| | || || ||| Sbjct 4293 AGGTGTAGGGTACTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGACCATCCTCAAGC 4234 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| ||||| || || ||||| ||||| | |||| | |||||||||| || | Sbjct 4233 TGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCC-TGGAT 4175 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 ||||| | ||| | | | ||||| |||||| ||||| | || || || || || Sbjct 4174 CTTTGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCAAGAGTGATGGTCTTTCC 4115 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| ||||| ||||| |||||||| Sbjct 4114 GGTCAAAGTCTTGACGAAGATCTGCAT 4088 >seq105 Length=629 Score = 136 bits (150), Expect = 4e-27 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || ||||| |||||||| |||||||| ||||||||||| || || | || ||||| Sbjct 585 AGGTGAAGCGTACTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTACGTCCATCTTCGAGT 526 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| ||||| ||||| || || ||||| | || | | |||||||| |||| Sbjct 525 TGCTTGCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATTCCTTCCTTGTCTTGGATT 466 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || |||| ||| | | | |||||| ||||| ||||||| ||| || ||||| || Sbjct 465 TTCGCCTTC-ACGTTGTCAATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTTTTCCC 407 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||||||| || || |||||||| Sbjct 406 TGTGAGCGTCTTGACAAAGATCTGCAT 380 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| || || ||| Sbjct 378 CCTCCTCGAAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 319 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || ||||||||||| || ||||| || || || ||||| || | |||| Sbjct 318 AGAGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCTGGGGGA 259 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || |||| || | | | ||||||| |||||| || Sbjct 258 ATGCCCTCCTTGTCTTGGATCTTCGCCTTC-ACATTGTCAATAGTGTCGGACGACTCGAC 200 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || ||||| || ||||| ||||| || ||||| Sbjct 199 CTCCAAGGTGATCGTCTTGCCCGTGAGAGTCTTAACGAAGATTTGCAT 152 >seq4155 Length=6849 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || ||| ||| ||||||||||| ||||| || Sbjct 76 CCGCCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTCAGAC 135 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | |||| ||||||||||| || ||||| || || || |||||||| | ||| Sbjct 136 AGGGTCCTGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGGTCAGGCGGA 195 Query 41756 A 41756 | Sbjct 196 A 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462244195198800