Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq168 102 8e-17 >seq168 Length=158170 Score = 102 bits (112), Expect = 8e-17 Identities = 248/371 (67%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || || |||||| || | || || || | |||||||||||||| ||||| || | Sbjct 52990 CACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGTAAGT 53049 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||||| || || ||||| | ||| || || | || ||||| ||||| ||||| Sbjct 53050 CCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAAGAAA 53109 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 |||||||| || | || ||||| | | |||||| | | || | | || | | Sbjct 53110 ATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATCTGAA 53169 Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTA 17203 ||||| | | |||| || || || |||| |||||| ||||| || ||||| | | Sbjct 53170 ATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGCATCA 53229 Query 17204 AATA-AT-TTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 || | || ||| | | |||| || | ||||| || |||||||| || || Sbjct 53230 AAGAGATATTCACGCT---GAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGAATAG 53286 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 |||||| || ||||||||||| || || || || || || || || || || || Sbjct 53287 GCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTCGGCA 53346 Query 17321 ATTTGAACTTC 17331 | ||| ||||| Sbjct 53347 ACTTGGACTTC 53357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517470264768600