Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6557 187 3e-42 seq1875 150 2e-31 >seq6557 Length=2833 Score = 187 bits (206), Expect = 3e-42 Identities = 219/294 (74%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 ||||||||||| |||| ||| | |||||| || | | ||||| ||| | || ||||| Sbjct 1226 AGCTGGTCCACCCCCTCCCCGCTGTAATCCCGCTCGCAATCCACATACTCCGCGCCGAAA 1167 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 || | ||||||||||||||| || ||||||||||| || | | |||||||||||| || Sbjct 1166 TGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCCCTCCTGTGCCCCAGGCCC 1107 Query 146116 GCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAG 146175 || ||||||| || ||||||||| ||||||||||||| ||||||||||||||| Sbjct 1106 CTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCCTCGCGGAG 1047 Query 146176 AGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTC 146235 || || |||||| || || | | ||||||||||||||| |||| || ||| | | Sbjct 1046 AGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGCTCCTCGATGATCCCGCGC 987 Query 146236 CAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGC--CCCGC-AGGGAGTAC 146286 ||| | ||| ||||| || || || | | || ||||| |||||| || Sbjct 986 TGGAACGTGCGCTTCGTGGTTAGGAGCGGCAGCGTGCCGCCCGCGAGGGAGAAC 933 Score = 134 bits (148), Expect = 2e-26 Identities = 226/321 (70%), Gaps = 11/321 (3%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| | ||| |||| || || | ||| ||||||| | |||||||||| || Sbjct 1765 CATCTTCATTGCAATGCCCGCATGCGGCTCGTACCCCTCCACCACAAAGTCCTCGTACCC 1706 Query 145605 GAAGTCATCTATGTCCTCCACCCGC---CTCAGGATCCTGAGCCTGGGAAAGGGCCGGGG 145661 ||||| || || ||| | | || | || || |||| | || || ||||| || Sbjct 1705 AAAGTCCTCGATATCCACGATCCCCTCCCTTGCCCACCGGAGCTTCGGGAACGGCCGCGG 1646 Query 145662 GCTCCTGGT-CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCC 145720 ||| | | |||||| | ||||| | ||||||| | |||| ||||||||||| | Sbjct 1645 -CTCGCGCTGCAGCTGCTCTTCCAGGGCGGCGACGTGGTCGCGGTACACGTGCGCGTCGC 1587 Query 145721 CCAGGACGTGGATGA--AGTCCCCGGGC-TCGAGGCCCGTGAGGTGGGCGACCATGTAGG 145777 | || ||||||| ||| | ||| ||| |||||||| ||| |||| ||||| | Sbjct 1586 CGAGC---TGGATGATCAGTTCTGCGGCGTCGGTGCCCGTGACGTGCGCGAGCATGTGCG 1530 Query 145778 TCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCT 145837 | ||||| | |||| || |||||||| || | || ||||||| ||| | ||||||| Sbjct 1529 TGAGCAGCGCGTAGGACGCGATGTTGAACGGGATGCCGAGCCCCAGGTCTGCGGAGCGCT 1470 Query 145838 GGTACAGCTGGCAGGAGAGCT 145858 |||||| | |||| ||||||| Sbjct 1469 GGTACATCAGGCACGAGAGCT 1449 >seq1875 Length=13504 Score = 150 bits (166), Expect = 2e-31 Identities = 219/302 (73%), Gaps = 7/302 (2%) Strand=Plus/Plus Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 |||| ||||||||||| |||| ||||| ||||| || | | ||||| ||| | || Sbjct 12292 TCCCGCAGCTGGTCCACCCCCTCCCCCCCATAATCCCGCTCGCAATCCACATACTCCGCG 12351 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGCTCCCTGTGCCC 146108 || || || | |||||||||||| || || || |||| || ||| || ||| ||||| Sbjct 12352 CCAAAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGC-GCCTATGCCC 12410 Query 146109 CA-GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCC 146167 || |||| || | ||||||| || ||||||||| ||||||||||||| |||||| Sbjct 12411 CAGGCCCCGCGC-CTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCT 12469 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| || || |||||||||| || || | | |||||| |||||||| |||| || Sbjct 12470 TCGCCGACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCCTCGATGA 12529 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGC--CCCGC-AGGGAGT 146284 ||| | | ||| | ||| || |||||||| || | | || ||||| |||||| Sbjct 12530 TCCCGCGCTGGAACGTGCGCTTCGTCGTCAGCAGCGGCAGCGTGCCGCCCGCGAGGGAGA 12589 Query 146285 AC 146286 || Sbjct 12590 AC 12591 Score = 120 bits (132), Expect = 4e-22 Identities = 128/168 (76%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 145693 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAG---TCCCCGGGCTCG 145749 ||||||| | |||| ||||||||||| || || ||||||| | ||| ||| |||| Sbjct 11904 ACGTGGTCGCGGTACACGTGCGCGTCGCC---GAGCTGGATGACGAGCTCCGCGGCCTCG 11960 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||| ||| |||| ||||| || ||||| | ||| || |||||||| || Sbjct 11961 GTGCCCGTGACGTGCGCGAGCATGTGCGTGAGCAGCGCGTACGACGCGATGTTGAACGGG 12020 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC 145857 | ||| ||||||| |||| | ||||||||||||| | |||| |||||| Sbjct 12021 ATCCCGAGCCCCAGGTCCGCGGAGCGCTGGTACATCAGGCACGAGAGC 12068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589990906945800