Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq168 221 1e-52 seq2477 138 1e-27 seq142 102 8e-17 seq1364 93.3 4e-14 >seq168 Length=158170 Score = 221 bits (244), Expect = 1e-52 Identities = 394/572 (69%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| |||||||| |||||||| | |||||| ||||||| Sbjct 53546 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCTTTCTGGACTGCGGAGGAGATGGACCTC 53487 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| || | ||||||| | || | || ||||||||||| ||||||||| | Sbjct 53486 TCCAAAGATATCCACGACTGGACCAACCGTCTAAATGACAACGAGCGTCATTTCATCTCG 53427 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| ||| || || || ||||||||||| || | ||| | Sbjct 53426 CACGTTCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTTCTGGAGAGG 53367 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || | | || || || || ||||||||||| || ||||| ||||| || ||| ||| Sbjct 53366 TTTTCAAATGAAGTCCAAGTTGCCGAGGCGCGCTGTTTCTATGGCTTCCAAATCATGATG 53307 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA---CGTGCGCTCTTCG 116929 |||||| | || || ||| |||||| ||||||||||| || | | || | Sbjct 53306 GAGAACATCCATTCCGAAGCCTATTCGCTTCTCATCGACACTTATATCAAGGATGCTACT 53247 Query 116930 GAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 || | ||| || |||| | |||||||||||||| || ||| |||| ||||| Sbjct 53246 CAGCGTGAATATCTCTTTG----ATGCCATCGAGACGATTCCTTGCATCAAGCGCAAGGC 53191 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 || ||||| || ||||| | | | | | | || ||||| ||||| || || Sbjct 53190 AGAATGGGCCCTTGAGTGGATTTCAGATAAGAAATCAACATTTGGCGAACGCCTCGTTGC 53131 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| || || ||||| | ||||| || || || || | || || ||| | || Sbjct 53130 GTTCGCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGTTTGCGTCAATCTTCTGGATGAA 53071 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| || ||| | ||||| || || ||||| |||||| || ||| | || || || Sbjct 53070 GAAGCGTGGCTTGATGCCTGGACTTACTTTTTCCAACGAACTTATCAGTCGTGATGAAGG 53011 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 |||| ||| ||||| || || || |||| Sbjct 53010 CATGCACACCGATTTTGCGTGCTTACTCTTCA 52979 >seq2477 Length=31422 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||||||||| |||||||| | || || || || | Sbjct 18701 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTC 18760 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || || | | |||| || || | |||||||| ||||||||| | |||| Sbjct 18761 TGACACGATTGATAATG-TGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACC 18819 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| | |||| ||| || ||||| || || |||| ||| |||||| ||||||| Sbjct 18820 AGCAACGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACA 18879 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||| ||||||||| | || || ||||| Sbjct 18880 ACATTCAGAAGGAGTCTACCCTCCATCT 18907 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || || ||||| || || ||||||||| | || ||||| | | Sbjct 19491 ATGCAGATATTCGTCAAGACCCTCACCGGGAAGACCATCACCCTGGAGGTCGAGTCGTCT 19550 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 19551 GACACGATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 19609 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| ||||| || || | ||||||||| |||||||| Sbjct 19610 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTCTCGGACTACAA 19669 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| ||| || || Sbjct 19670 CATCCAGAAAGAGAGCACTCTTCA 19693 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| |||||||| | || ||||| | || Sbjct 19263 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGTCTTCC 19322 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| || || || || | ||||| Sbjct 19323 GACACGATCGACAACG-TCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGACCA 19381 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | || || || ||||| || || | ||| |||||| || ||||| Sbjct 19382 GCAGCGCTTGATTTTTGCCGGGAAGCAGCTCGAAGATGGGCGGACCCTCTCGGATTACAA 19441 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 19442 CATCCAGAAGGAGTCGACACTTCATCTCGT 19471 >seq142 Length=14559 Score = 102 bits (112), Expect = 8e-17 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | || |||||||| || |||| ||| ||||| |||||||| || | |||||| Sbjct 5318 ATCCCCCCCGATCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACC 5259 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||||||||||||| |||||| | || || ||||| || Sbjct 5258 CTCAGCGACTACAACATCCAAAAGGAGTCTACCCTTCATCTTGT 5215 >seq1364 Length=53523 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || || |||||||||||| | || || || | | Sbjct 5394 AATGCAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTC 5335 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | | |||| | |||| ||||| | || |||||||| || || | || | Sbjct 5334 CGATACCATCGACAACG-TGAAGGCGAAAATCCAAGATAAAGAGGGGATTCCTCCTGATC 5276 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || || | |||||| || ||| |||| || | || || || ||||||| Sbjct 5275 AACAGCGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACA 5216 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||| || |||||| ||| || ||||| Sbjct 5215 ACATTCAAAAGGAGAGCACCCTTCATCT 5188 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || |||||| | || || ||||| |||||| |||| || ||| | | Sbjct 5621 ATGCAGATCTTTGTCAAAACGTTGACTGGGAAAACGATCACCCTCGAAGTTGAATCATCG 5562 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || || | || || || || || ||| | |||||| Sbjct 5561 GATACTATAGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAG 5502 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| || || || ||||| || | ||||| || ||||| ||| Sbjct 5501 CAACGCCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACTCTATCTGACTATAAC 5442 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || |||||||| | || | ||||| || | ||| || | || || Sbjct 5441 ATTCAGAAGGAATCTACATTACATCTCGTTCTCCGCCTGCGTGGTGG 5395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515144203405200