Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2477 109 5e-19 seq1364 98.7 9e-16 >seq2477 Length=31422 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | || |||||| || |||||||| || | ||||| |||||||| Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || ||||| |||| |||||||| || ||||| || |||||||||||||| || Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | |||| ||||| | ||||||||| | ||| | || || | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || |||||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| ||| ||||| || |||||||| ||||| | ||| || ||||||||||| Sbjct 19188 TGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGC 19129 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || ||||| |||| | ||||||||| ||||| || || ||||||||||| || || Sbjct 19128 TTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTA 19069 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | |||||| || | ||| | || || || ||| Sbjct 19068 GCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTC 19009 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||| Sbjct 19008 AGGGTCTTGACGAAGATTTGCAT 18986 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118541 TGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCC 118600 ||| ||||| || || ||||||||||| | || ||| ||| |||||||| || || Sbjct 19460 TGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCTTCGAGCTGCTTCCC 19401 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 || | || | |||||||| |||||||| || || ||||||||| || || || Sbjct 19400 GGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCTTGGATCTTAGCCTT 19341 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | |||| ||||| | ||||||||| | || | || |||||||| ||||| Sbjct 19340 GACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTCTTGCCGGTGAGAGT 19281 Query 118721 TTTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 19280 CTTGACAAAGATCTGCAT 19263 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 |||| || |||| |||||||| || ||||||||||| || | || ||| |||| Sbjct 18912 CACCGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCT 18853 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 |||| ||||| |||||| |||| | ||| ||||| || || || ||||| || |||||| Sbjct 18852 CGAGTTGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTT 18793 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | || | ||||| | | ||| ||||| | || | || | Sbjct 18792 GGATCTTGGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCT 18733 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || |||||||| Sbjct 18732 TGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18702 >seq1364 Length=53523 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| |||||||||||||| || | ||| || |||||| | ||| || || ||| | Sbjct 5202 CTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAACTGCTTCCCCGCGAA 5261 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || || ||||| ||||| ||||| || ||||| || ||| ||||| || || | Sbjct 5262 TATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTTTCGCCTTCACGTT 5321 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||| || | ||| ||||| | ||| | ||||| ||||| ||||| || || Sbjct 5322 GTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCGGTTAGAGTCTTCAC 5381 Query 118727 AAAAATCTGCAT 118738 ||||||||||| Sbjct 5382 GAAAATCTGCAT 5393 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||||||||||| |||||||||||||| || || || |||||||||||| Sbjct 5646 GTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAAGGTTCGACCATCCTCGAGCTG 5705 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||||||| |||| ||||| || || || || || || Sbjct 5706 TTTTCCAGCGAAGATAAGACGTTGTTGGTCAGGTGGAAT 5744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433768829298340