Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2477 118 7e-22 seq1364 105 4e-18 >seq2477 Length=31422 Score = 118 bits (130), Expect = 7e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 ||| ||| | ||| || |||||||| ||||||||||| || || || | || || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTA 34301 ||||||||| || || || || ||||| |||||| ||| | || ||||||||| | Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 34302 TCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGC 34361 |||| ||| | | | | |||| || | ||| ||||| |||| |||||||| || | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 34362 CGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||| || || || || |||||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || || || || | || || | |||||| || || ||| Sbjct 19453 TCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAA 19394 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | |||||||||||| || | | |||||||| ||||| ||| | | | Sbjct 19393 ATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTG 19334 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| || ||||| |||| |||||||| |||||||||||||| || ||| Sbjct 19333 TCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACA 19274 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 19273 AAGATCTGCAT 19263 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || ||| |||| || | || || || ||||| Sbjct 18892 TCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCAGCGAAG 18833 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || |||||||| ||| | || || ||||| ||||| ||| | || Sbjct 18832 ATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATTA 18773 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || || || |||| |||||||| ||||| ||||| || || || Sbjct 18772 TCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACG 18713 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 18712 AAGATCTGCAT 18702 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||| || || || || ||| |||| || | ||||||||| || || Sbjct 19176 TCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAG 19117 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | |||||||||||| ||| | | ||||||||| ||||| ||| | || | Sbjct 19116 ATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTG 19057 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| |||| || ||||| || || || || || || || Sbjct 19056 TCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTCAGGGTCTTGACG 18997 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 18996 AAGATTTGCAT 18986 >seq1364 Length=53523 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || || ||||| ||| ||| ||||| ||||| ||||| || Sbjct 5394 TCCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAGA 5453 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || |||| ||||| || ||||| ||||| || |||||||| ||| Sbjct 5454 TAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGG 5513 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||| || ||||| ||| | || | |||| | ||| | ||||| || Sbjct 5514 AATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCAAC 5573 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| ||||| || || | ||||| |||||||||||||| Sbjct 5574 TTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34193 GTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCT 34252 || || || || || ||||||||||| || || ||| | || ||||||||||| || Sbjct 5197 GTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAACTGCTTCCCC 5256 Query 34253 GCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312 ||||| || || ||||| || || || | | ||| || || || || ||| Sbjct 5257 GCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTTTCGCCTTC 5316 Query 34313 AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTT 34372 | | | | || | ||||| || || || || | ||||||||||| ||||| ||||| Sbjct 5317 ACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCGGTTAGAGTC 5376 Query 34373 TTCACAAAGATCTGCAT 34389 ||||| || |||||||| Sbjct 5377 TTCACGAAAATCTGCAT 5393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323026148511200