Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq168 125 7e-24 seq331 116 4e-21 seq332 104 2e-17 >seq168 Length=158170 Score = 125 bits (138), Expect = 7e-24 Identities = 241/351 (69%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 ||| ||||||||||| || | ||| ||||| | ||| ||||||||||| ||||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGT 53045 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 | ||| |||||||| || || || || | ||| || |||| || || ||||| || || Sbjct 53046 AAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAA 53105 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||| || ||||| || ||||| ||||| | | ||||| ||||| | || ||| || | Sbjct 53106 GAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATC 53165 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || ||||| | |||||||| | || || || || || || || || || Sbjct 53166 TGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGC 53225 Query 14440 ATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGC-T 14496 || ||| | || ||| || ||| | |||| || || || || || || |||| Sbjct 53226 ATCAAAGAGATATTCACGCTGAGTAGCATCCTTG--ATATAAGTGTCGATGAG-AAGCGA 53282 Query 14497 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547 ||| ||| || || ||||| ||||| || || || ||||| ||||| Sbjct 53283 ATAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACA 53333 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 13934 TTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993 ||||||||||| || ||||| || | ||||| || | ||||| || || || ||||| Sbjct 52666 TTTTCAAAGAAATTCGTTTTCCCCTGGAGTGAAATCATGTCCATGAAGTCGAAGGGATTC 52725 Query 13994 GTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCA 14053 || || | |||| || || || || | | |||| || || |||| |||||| Sbjct 52726 GTCGAATTGTACACCTTGTCGTTGCCCAGAGCGACAAGTAGTCGGTCGGCAACGAACTCG 52785 Query 14054 ATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGaa 14102 || || || |||| || ||| ||||||| || || ||||| ||||||| Sbjct 52786 ATGTACTGGCACATCAAGTCAGAATTCATGCCGATGAGTTTGACAGGAA 52834 >seq331 Length=21972 Score = 116 bits (128), Expect = 4e-21 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 14240 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 14299 ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 15725 ATAAGTTCGTTCGAAAAGCATAATCCTGGCATCAATCCTCGTTTTTTCAACCAAAATATA 15666 Query 14300 GCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGT 14356 | ||||| ||| ||||| || || |||||||| || || || |||| ||| ||| Sbjct 15665 GATGCGAAGGATGATGAAAAAAAAATCCCCTCAACCGCTGCGAATGCTAGTAAGCGT 15609 >seq332 Length=22363 Score = 104 bits (114), Expect = 2e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 14206 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 14265 |||||| || ||||| || || || | | ||||| ||||| ||||| |||||| Sbjct 1930 CGCAAATTCGGTGTGAAGTCCTTCGTCCCGAGAGATAAGCTCGTTCGAAAAACATAATCC 1989 Query 14266 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 14325 |||||||| ||||||||| || |||||||| |||| || || || ||||| || || Sbjct 1990 TGGCATCAGTCCTCGTTTCTTCAACCAAAAAATTGATGCAAAGGACGATGAAAAAAAAAT 2049 Query 14326 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGA 14367 |||||| ||||| || || |||| ||| || | ||||||| Sbjct 2050 TCCCTCGACTGCTGCGAATGCTAGTAAGCGCGTTGCAAACGA 2091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482275388568600