Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq168 98.7 9e-16 seq331 95.1 1e-14 >seq168 Length=158170 Score = 98.7 bits (108), Expect = 9e-16 Identities = 276/419 (66%), Gaps = 11/419 (3%) Strand=Plus/Plus Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 ||| ||||||||||| || | ||||| || | ||| || ||||| || ||||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGT 53045 Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745 | ||| |||||||| || || || || ||||| || || | ||||| || ||||| || Sbjct 53046 AAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAA 53105 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTG-TTGCT-- 11802 ||| || ||||| ||||| || || || || | | ||| ||| || ||| || || Sbjct 53106 GAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAAT--GTTGATTTCTTA 53163 Query 11803 --AGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATA 11860 || ||||| | |||||| || || || || | ||| || || || || Sbjct 53164 TCTGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATG 53223 Query 11861 GCGTTAAATAAATGCATTTTTTCT--ATATTATCTCTTACATATGTATCTATTAATAAAC 11918 || | ||| | || ||| || || ||| | | ||| || || || | | Sbjct 53224 GCATCAAAGAGAT--ATTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCG 53281 Query 11919 TATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCT 11978 ||| ||| ||||| || || ||||| ||||| || ||||||||||| || |||| Sbjct 53282 AATAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCT 53341 Query 11979 CTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCA 12037 | | | || || || |||| || ||| | ||||| || |||||||||||| Sbjct 53342 CGGCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCA 53400 >seq331 Length=21972 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || ||||| || ||||| |||||| |||||||||||||||||||| | |||||||||| Sbjct 15725 ATAAGTTCGTTCGAAAAGCATAATCCTGGCATCAATCCTCGTTTTTTCAACCAAAATATA 15666 Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTA 11777 | || || || ||||| || || ||||| || ||||| ||||||| || Sbjct 15665 GATGCGAAGGATGATGAAAAAAAAATCCCCTCAACCGCTGCGAATGCTAGTA 15614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468456600358800