Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq168 179 5e-40 >seq168 Length=158170 Score = 179 bits (198), Expect = 5e-40 Identities = 379/562 (67%), Gaps = 10/562 (2%) Strand=Plus/Plus Query 36155 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 36214 || || || |||||| ||| | || || || | ||| || | |||||||||||| || Sbjct 52987 AAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGTA 53046 Query 36215 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 36274 ||||| ||||| | ||||||||| || | ||| || || |||||||| |||||||| ||| Sbjct 53047 AGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAAG 53106 Query 36275 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT 36334 ||||| || ||||| || || || |||| || | || ||| | | | | || | Sbjct 53107 AAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATCT 53166 Query 36335 ---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 36391 ||||||| | ||||| || ||||| || | ||||| || ||||| || ||| Sbjct 53167 GAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGCA 53226 Query 36392 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 36451 | ||||||||| | | | || ||| || | ||| || || || | ||| ||| Sbjct 53227 TCAAAGAGATATTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGAATAG 53286 Query 36452 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 36511 ||| ||||| ||||| || || ||||| || || |||||||| | ||||||| | Sbjct 53287 GCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTCGGCA 53346 Query 36512 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAA--TTTTCATTCACTATTCCGTCACTGG 36569 | || ||||| | |||| | ||| | || || || || || || || ||| || Sbjct 53347 ACTTGGACTTCATTTGAAAACC--TCTCCAGAAGGTTCTCGTTGACAATACCATCAGAGG 53404 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTTTAT 36626 | || || || || | || || || |||| ||||| ||| | || Sbjct 53405 CAGCGAAGAAAGCAAGAACGTGCGAGATGAAATGACGCTCGTTGTCATTTAGACGGTTGG 53464 Query 36627 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 36686 |||| || | ||||||||| || | |||| || ||| | ||||| || || ||||| | Sbjct 53465 TCCAGTCGTGGATATCTTTGGAGAGGTCCATCTCCTCCGCAGTCCAGAAAGACGCCTCAG 53524 Query 36687 CCTTTTTATACATATTCCAGAT 36708 |||| || ||||| | |||||| Sbjct 53525 CCTTCTTGTACATTTGCCAGAT 53546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658076994721800