Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1875 134 1e-26 seq6557 113 4e-20 >seq1875 Length=13504 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 21234 CGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCA 21293 ||||||||||||||||||| ||| | || | ||| || |||||||| ||| Sbjct 12295 CGCAGCTGGTCCACCCCCTCCCCCCCATAATCCCGCTCGCAATCCACATACTCCGCGCCA 12354 Query 21294 AAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAG 21353 ||||| | |||||||||||| |||||||| |||| |||||||||||| | | ||| | | Sbjct 12355 AAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGCGCCTATGCCCCAGG 12414 Query 21354 CCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCG- 21412 ||| ||||| | | || || ||||||| ||||||| || || ||||| | || Sbjct 12415 CCCCGCGCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCC-CTTCGC 12473 Query 21413 CGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTC 21463 |||||| |||||||| || ||||| | | |||||||||| |||||| Sbjct 12474 CGACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCCTC 12524 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 20888 CGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 ||| ||||| ||||| | ||||||||| | || | | ||||||| | ||| Sbjct 11858 CGGGAACGGCCGCGGCTCGCGCCGCAGCTGCTCCTCGAGCGCGCCGACGTGGTCGCGGTA 11917 Query 20948 AACGTGGGCGTCACCCAAGGTG--TGCACAAAGTCTCCCGGGGTCAG-GCCCGTGACGTG 21004 ||||| ||||| || | | || || || | || | ||| || | |||||||||||| Sbjct 11918 CACGTGCGCGTCGCCGA-GCTGGATG-ACGAGCTC-CGCGGCCTCGGTGCCCGTGACGTG 11974 Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064 |||| || | ||| || || ||||| |||||||| ||||||| |||||| |||| Sbjct 11975 CGCGAGCATGTGCGTGAGCAGCGCGTACGACGCGATGTTGAACGGGATCCCGAGCCCCAG 12034 Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAGC 21098 ||| ||||| | |||||||| | |||| || ||| Sbjct 12035 GTCCGCGGAGCGCTGGTACATCAGGCACGAGAGC 12068 >seq6557 Length=2833 Score = 113 bits (124), Expect = 4e-20 Identities = 211/302 (70%), Gaps = 10/302 (3%) Strand=Plus/Minus Query 21167 GGGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGGCCG--CCTGTTAATTAG-AT 21222 |||||||||||||| || | |||||||||||| || || | |||| | | | || Sbjct 1296 GGGGTTCCACGCGCTCAGGATGATGCGCCGATCCGTCGGATCCTCCCTGATCTTGCGGAT 1237 Query 21223 CCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGT 21282 ||| || ||||||||||||||||||| || ||| | ||| || | Sbjct 1236 GCACT-CG---CGCAGCTGGTCCACCCCCTCCCCGCTGTAATCCCGCTCGCAATCCACAT 1181 Query 21283 ACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGC 21342 ||||||| || ||||| | ||||||||||||||||||||||||||| |||||| | | | Sbjct 1180 ACTCCGCGCCGAAATGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCCCTCC 1121 Query 21343 GGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTA 21402 || ||| | |||| | || | | || || ||||||| ||||||| || || | Sbjct 1120 TGTGCCCCAGGCCCCTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCA 1061 Query 21403 CGCCGC-GGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCC 21461 |||| | ||| || || || || ||| || ||||| | | ||||| |||| |||| Sbjct 1060 CGCCCCTCGCG-GAGAGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGCTCC 1002 Query 21462 TC 21463 || Sbjct 1001 TC 1000 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 20888 CGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 ||| ||||| ||||| | | ||||||| ||||| | ||||||| | ||| Sbjct 1660 CGGGAACGGCCGCGGCTCGCGCTGCAGCTGCTCTTCCAGGGCGGCGACGTGGTCGCGGTA 1601 Query 20948 AACGTGGGCGTCACCCAAGGTG--TGCACAAAGTCTCCCGGGGTCAG-GCCCGTGACGTG 21004 ||||| ||||| || | | || || || ||| | || ||| | |||||||||||| Sbjct 1600 CACGTGCGCGTCGCCGA-GCTGGATGATCAGT-TCTGC-GGCGTCGGTGCCCGTGACGTG 1544 Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064 |||| || | ||| || || |||||| |||||||| ||||||| ||||| |||| Sbjct 1543 CGCGAGCATGTGCGTGAGCAGCGCGTAGGACGCGATGTTGAACGGGATGCCGAGCCCCAG 1484 Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCT 21099 ||| ||||| | |||||||| | |||| || |||| Sbjct 1483 GTCTGCGGAGCGCTGGTACATCAGGCACGAGAGCT 1449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427715288559600