Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2477 95.1 1e-14 >seq2477 Length=31422 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || |||||||| || || | || | | ||| ||||| ||||| ||| Sbjct 18898 GTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCA 18839 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||||| ||||||||| || || || |||||||||||||| ||| || || Sbjct 18838 GCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTC 18779 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | || ||| ||||| | || | |||||||| || | || Sbjct 18778 ACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTC 18719 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 18718 TTGACGAAGATCTGCAT 18702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || |||||||||||||| | || | ||| |||||||| || ||| Sbjct 19182 GTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCA 19123 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| ||| ||||| ||||| || || || || ||||| ||| || || Sbjct 19122 GCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTG 19063 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | | ||| || || | ||| | ||||| || |||| || Sbjct 19062 ACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTCAGGGTC 19003 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| ||||||||| Sbjct 19002 TTGACGAAGATTTGCATA 18985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495991791684000