Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq168 132 5e-26 seq331 113 4e-20 seq332 98.7 1e-15 >seq168 Length=158170 Score = 132 bits (146), Expect = 5e-26 Identities = 283/418 (68%), Gaps = 6/418 (1%) Strand=Plus/Plus Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715 ||| ||||||||||| || | ||| ||||| | ||| ||||||||||| ||||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGT 53045 Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775 | ||| |||||||| || || || || | ||| || |||| || || ||||| || || Sbjct 53046 AAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAA 53105 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835 ||| || ||||| || ||||| ||||| | || ||||| ||||| | || ||| || | Sbjct 53106 GAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATC 53165 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 ||| ||||| | |||||||| | || || || || || || ||||| || Sbjct 53166 TGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGC 53225 Query 13896 ATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGC-T 13952 || || | || ||| || ||| | |||| || || || || || || |||| Sbjct 53226 ATCAAAGAGATATTCACGCTGAGTAGCATCCTTG--ATATAAGTGTCGATGAG-AAGCGA 53282 Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 ||| ||| || || ||||| || || || || || ||||| ||||| | || || Sbjct 53283 ATAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTC 53342 Query 14013 TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCA 14070 | ||| || || |||| || || | ||| || || |||||||||||| Sbjct 53343 GGCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCA 53400 >seq331 Length=21972 Score = 113 bits (124), Expect = 4e-20 Identities = 92/112 (82%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 13696 ATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATT 13755 ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 15725 ATAAGTTCGTTCGAAAAGCATAATCCTGGCATCAATCCTCGTTTTTTCAACCAAAATATA 15666 Query 13756 GCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTA 13807 | ||||| ||| ||||| || || |||||||| || || || |||| || Sbjct 15665 GATGCGAAGGATGATGAAAAAAAAATCCCCTCAACCGCTGCGAATGCTAGTA 15614 >seq332 Length=22363 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 13662 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 13721 |||||| || ||||| || || || | | ||||| ||||| ||||| |||||| Sbjct 1930 CGCAAATTCGGTGTGAAGTCCTTCGTCCCGAGAGATAAGCTCGTTCGAAAAACATAATCC 1989 Query 13722 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 13781 |||||||| ||||||||| || |||||||| |||| || || || ||||| || || Sbjct 1990 TGGCATCAGTCCTCGTTTCTTCAACCAAAAAATTGATGCAAAGGACGATGAAAAAAAAAT 2049 Query 13782 TCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGA 13823 |||||| ||||| || || |||| || || | ||||||| Sbjct 2050 TCCCTCGACTGCTGCGAATGCTAGTAAGCGCGTTGCAAACGA 2091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478519135417800