Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq168 174 2e-38 >seq168 Length=158170 Score = 174 bits (192), Expect = 2e-38 Identities = 377/564 (67%), Gaps = 14/564 (2%) Strand=Plus/Plus Query 42062 AAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTG 42121 || || || |||||| ||||| || ||||| | ||| || | |||||||||||| || Sbjct 52987 AAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGTA 53046 Query 42122 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAG 42181 ||||| ||||| | ||||||||| || | ||| || || |||||||| |||||||| ||| Sbjct 53047 AGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAAG 53106 Query 42182 AAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT 42241 || || || ||||| || || || |||| || | || ||| | | | | || | Sbjct 53107 AAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATCT 53166 Query 42242 ---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 42298 ||||||| | ||||| || ||||| || | ||||| ||||| || |||||| Sbjct 53167 GAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGCA 53226 Query 42299 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATAC 42358 | ||||||||| | | | || ||| || | ||| || ||||| | ||| ||| Sbjct 53227 TCAAAGAGATATTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGAATAG 53286 Query 42359 ATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTA 42418 ||| ||||| ||||| || || || || || || |||||||| | ||||||| | Sbjct 53287 GCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTCGGCA 53346 Query 42419 ACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCT 42478 || || ||||| | |||| | || | || ||||| || || || ||| ||| Sbjct 53347 ACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCAGAGGCA 53406 Query 42479 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT-------TT 42531 || || || || | || || || ||| | || || ||| | | || Sbjct 53407 GCGAAGAAAGCAAGAACGTGCGAGATGAAA----TGACGCTCGTTGTCATTTAGACGGTT 53462 Query 42532 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591 |||| || | ||||||||| || | || | || || | ||||| || || || || Sbjct 53463 GGTCCAGTCGTGGATATCTTTGGAGAGGTCCATCTCCTCCGCAGTCCAGAAAGACGCCTC 53522 Query 42592 TGCCTTTTTATACATATTCCAGAT 42615 ||||| || ||||| | |||||| Sbjct 53523 AGCCTTCTTGTACATTTGCCAGAT 53546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671041507300200