Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq168 127 3e-24 seq5512 89.7 8e-13 >seq168 Length=158170 Score = 127 bits (140), Expect = 3e-24 Identities = 336/509 (66%), Gaps = 12/509 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| |||||| |||| || || ||||| | || ||| | || || Sbjct 53546 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCTTTCTGGACTGCGGAGGAGATGGACCTC 53487 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||| || | |||| ||| | ||| | | ||| | ||||| | || || ||| Sbjct 53486 TCCAAAGATATCCACGACTGGACCAACCGTCTAAATGACAACGAGCGTCATTTCATCTCG 53427 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTG-ACACG 125197 ||| || | || ||||| || | ||| ||||| || |||||||| || || || | | | Sbjct 53426 CACGTTCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTTCTGGAGAGG 53367 Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 || |||| | | ||| || | |||| | || || || || |||||||||||| Sbjct 53366 TTT---TCAAATGAAGTCCAAGTTGCCGAGGCGCGCTGTTTCTATGGCTTCCAAATCATG 53310 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---T 125312 || |||||| | || || ||| || || || || |||| || || || | Sbjct 53309 ATGGAGAACATCCATTCCGAAGCCTATTCGCTTCTCATCGACACTTATATCAAGGATGCT 53250 Query 125313 CCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 | || ||| || | |||||| | || ||||| ||| | || | || ||| Sbjct 53249 ACTCAGCGTGAATA---TCTCTTTGATGCCATCGAGACGATTCCTTGCATCAAGCGCAAG 53193 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || |||||| || |||||| || | || || | | | ||| | || || Sbjct 53192 GCAGAATGGGCCCTTGAGTGGATTTCAGATAAGAAATCAACATTTGGCGAACGCCTCGTT 53133 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || ||||| || |||||||| || ||||| || || |||||| | ||||| ||| | Sbjct 53132 GCGTTCGCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGTTTGCGTCAATCTTCTGGATG 53073 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGAC 125521 |||||||| || | ||||| ||||| || Sbjct 53072 AAGAAGCGTGGCTTGATGCCTGGACTTAC 53044 >seq5512 Length=8717 Score = 89.7 bits (98), Expect = 8e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 ||||| ||||| | |||| |||| | | || |||||| ||||| |||||||| Sbjct 5583 GTGCCGATGCTGCGCGCGTACGATGCTACTGCTCGTTACGTTGACCAGGGAGGCAATAAG 5642 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 ||||| || || | ||| ||||| | ||||||||||| || || ||| |||| || || Sbjct 5643 CGGCCTGGAGCGTTCGCCATCTACATCGAACCTTGGCATGCTGATGTTCTTGATTTCCTC 5702 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGA 96994 || |||| || || |||| |||||| | || |||||||| Sbjct 5703 GACCTGCGAAAGAATCATGGCAAGGAAGAGTCTCGTGCCAGGGA 5746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740951329570200