Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1364 172 1e-37 seq2477 105 2e-17 >seq1364 Length=53523 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || ||||||||||||||||| |||||||| ||||||||| Sbjct 5392 ATTCCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCA 5451 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||||||| | ||| || || ||||| |||||||| || || || | || || || || Sbjct 5452 GATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGG 5511 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| |||||||| ||||| || || ||||| |||| ||||| | ||| Sbjct 5512 GGAATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCA 5571 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || ||||| | ||||| ||||| |||||||| Sbjct 5572 ACTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || ||||| || |||||||| ||||| | || || || | || || || || || Sbjct 5203 TCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAACTGCTTCCCCGCGAAT 5262 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||||||||||||||| || || |||||||| || || || || || || || Sbjct 5263 ATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTTTCGCCTTCACGTTG 5322 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||||| || || ||||| || || || || || || || || || || || Sbjct 5323 TCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCGGTTAGAGTCTTCACG 5382 Query 104549 AATATCTGCATT 104560 || ||||||||| Sbjct 5383 AAAATCTGCATT 5394 >seq2477 Length=31422 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| || || ||||| || || || | ||| || || || || || |||||||| Sbjct 19681 TCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAG 19622 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || || || || || || || ||||||||||| || || || || Sbjct 19621 ATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 19562 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | || ||||| || || || ||||| || || || || || || Sbjct 19561 TCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACG 19502 Query 104549 AATATCTGCAT 104559 ||||||||||| Sbjct 19501 AATATCTGCAT 19491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151226609559660