Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq6557 116 3e-21 seq1875 102 6e-17 >seq6557 Length=2833 Score = 116 bits (128), Expect = 3e-21 Identities = 212/302 (70%), Gaps = 10/302 (3%) Strand=Plus/Minus Query 25666 TTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCC 25725 || |||||||| |||| || |||||||| || || || | |||||||| | | Sbjct 1298 TTGGGGTTCCACGCGCTCAGGATGATGCGCCGATCCGTCGGATCCTCCCTGATCT--TGC 1241 Query 25726 GCGGTGTTTT---GCAGCTGATCCACCCCCATCCCCGA-GTAGTCT-GCCCTCATGTCCG 25780 | | || | ||||||| ||||||||| |||||| ||| || || | || ||| Sbjct 1240 G-GATGCACTCGCGCAGCTGGTCCACCCCC-TCCCCGCTGTAATCCCGCTCGCAA-TCCA 1184 Query 25781 TGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTT 25840 ||||| || ||||||| | ||||||||||||||||||||| || ||||| || | Sbjct 1183 CATACTCCGCGCCGAAATGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCCC 1124 Query 25841 CCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT 25900 ||||||| | | ||||||| || | || | | || || ||| |||||||||||| Sbjct 1123 TCCTGTGCCCCAGGCCCCTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCT 1064 Query 25901 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 25960 | || ||| || ||||||| || || || || || | |||||||| ||||||| Sbjct 1063 TCACGCCCCTCGCGGAGAGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGCT 1004 Query 25961 CC 25962 || Sbjct 1003 CC 1002 >seq1875 Length=13504 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 25736 GCAGCTGATCCACCCCCATCCCCGAGTAGTCT-GCCCTCATGTCCGTGTACTCTGCTCCG 25794 ||||||| ||||||||| |||| || || || | || ||| ||||| || || Sbjct 12296 GCAGCTGGTCCACCCCCTCCCCCCCATAATCCCGCTCGCAA-TCCACATACTCCGCGCCA 12354 Query 25795 AAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAG 25854 |||| | |||||||||||| |||||||| || | || || || ||| ||| | | | Sbjct 12355 AAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGCGCCTATGCCCCAGG 12414 Query 25855 CCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCG 25914 |||| | || | || | | || || ||| ||||||||||||| || |||||| | Sbjct 12415 CCCCGCGCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCTTCGCC 12474 Query 25915 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 || || | |||||| || || || | |||||||||||||||||| Sbjct 12475 GACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCC 12522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340089326502585