Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1364 109 5e-19 seq2477 91.5 1e-13 >seq1364 Length=53523 Score = 109 bits (120), Expect = 5e-19 Identities = 151/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581 |||||| ||||||||||||||||||||||| |||| || || || | ||||||| || Sbjct 5190 ATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGA-AAGAGTACGTCCATCCTCCAACT 5248 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || || | || | ||||| ||||| || | | || || || |||| Sbjct 5249 GCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTT 5308 Query 48642 TCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACC 48699 || ||| | | | || |||||||||| |||||| ||| | || |||||||| || Sbjct 5309 TCGCCTTCACGTTGTCG--ATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCC 5366 Query 48700 GGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| ||||| ||||| ||||||||||| Sbjct 5367 GGTTAGAGTCTTCACGAAAATCTGCAT 5393 >seq2477 Length=31422 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||||||||| |||||| || ||||||||||| | | ||| | || || ||||| Sbjct 19466 ATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCTTCGAGCTG 19407 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | |||| || |||||||| || || | | ||||||||| || || Sbjct 19406 CTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCTTGGATCTT 19347 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || || || |||| |||||| ||| | || ||||| || ||| Sbjct 19346 AGCCTTGACGTTGTCG--ATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTCTTGCCG 19289 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || ||||| |||||||| Sbjct 19288 GTGAGAGTCTTGACAAAGATCTGCAT 19263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421191414581645