Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1835 93.3 2e-14 seq3169 91.5 8e-14 seq10147 84.2 1e-11 seq5033 84.2 1e-11 seq672 84.2 1e-11 >seq1835 Length=2978 Score = 93.3 bits (102), Expect = 2e-14 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 70 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 11 Query 11528 CCGTCGACGA 11537 ||||||| || Sbjct 10 CCGTCGAAGA 1 Score = 89.7 bits (98), Expect = 3e-13 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 1760 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 1819 Query 11528 CCGTCGAC 11535 ||| |||| Sbjct 1820 CCGACGAC 1827 >seq3169 Length=3120 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/91 (82%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 || ||||||| | ||||||| | | |||||||||| ||||||||||||||||||| Sbjct 1298 AAGAAAAAATAGACATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCA 1239 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||| |||| |||||||| | ||||| Sbjct 1238 CGACGCTCTAACCAGCTGAGCTAGTCGGCCG 1208 >seq10147 Length=2793 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 1589 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 1648 Query 11528 CCG 11530 ||| Sbjct 1649 CCG 1651 >seq5033 Length=6007 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 1786 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 1845 Query 11528 CCG 11530 ||| Sbjct 1846 CCG 1848 >seq672 Length=4386 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||| |||||||| | || Sbjct 1042 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAGTCGG 983 Query 11528 CCG 11530 ||| Sbjct 982 CCG 980 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261454088270020