Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2477 102 7e-17 seq1364 102 7e-17 >seq2477 Length=31422 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || ||||| || ||| |||| || || | ||||| || |||||||| ||||| || Sbjct 19418 ATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTT 19359 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||||||| | ||| ||||| | ||||| || | ||||| Sbjct 19358 GTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGAT 19299 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || ||||| || |||||||||||||| Sbjct 19298 GGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 >seq1364 Length=53523 Score = 102 bits (112), Expect = 7e-17 Identities = 148/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCT 94862 || || ||||||||||| || | |||||| | | |||| || || ||||||||| | Sbjct 5419 TGTAATGTAGATTCCTTCTGAATGTTATAGT--CAGATAGAGTGCGACCATCCTCCAGTT 5476 Query 94863 GTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTT 94922 | ||||| | ||||| | | |||||| ||||| ||||| ||||| || || | || | Sbjct 5477 GCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCT 5536 Query 94923 TTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAG 94982 | ||||| || | | | ||| || | || || || | ||||| ||||| |||| Sbjct 5537 TCGCCTTCACATTGTCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTTTTCCCAG 5596 Query 94983 TAAGAGTTTTCACAAAGATCTGCATGC 95009 | | ||||| |||||||||||||||| Sbjct 5597 TCAACGTTTTGACAAAGATCTGCATGC 5623 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || || | || || | | || ||||| |||||||| || ||||| Sbjct 5238 ATCCTCCAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTT 5297 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||||| ||||| ||| | ||| || || | || || |||| ||||| Sbjct 5298 ATCTTGGATTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGAT 5357 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| || || ||||| ||||| || |||||||| Sbjct 5358 GGTTTTCCCGGTTAGAGTCTTCACGAAAATCTGCAT 5393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448225945612200