Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1314 107 3e-18 >seq1314 Length=22516 Score = 107 bits (118), Expect = 3e-18 Identities = 302/455 (66%), Gaps = 8/455 (2%) Strand=Plus/Plus Query 193639 AACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGC 193698 ||||| | |||||||| ||||| || || ||| || || |||||||| || || ||| Sbjct 11103 AACCTACCGAGATCTACAATCTCGGCGCGCAATCGCACGTCAAAGTTTCTTTCGAAATGG 11162 Query 193699 CAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA 193758 | || || || | ||||| | | || ||||| | | ||||| || || || | Sbjct 11163 CCGAATACACCGGAGACGTTGACGGCCTTGGTACTCTACGCCTCCTTGATGCCGTCCGCA 11222 Query 193759 TGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGT- 193817 | || ||||||| | || |||||||||| || || || |||||||| Sbjct 11223 CTTGTGGCTTGGAGAAGCACGTCAAGTTCTATCAGGCGTCGACATCGGAGCTGTATGGCA 11282 Query 193818 -GGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGG 193876 |||| | || | | ||| | | ||||| |||||||| |||| || || |||||||| Sbjct 11283 AGGTGGTGGAGACCCCCCAG-AGC-GAAACGACACCATTCTATCCCCGATCCCCTTATGG 11340 Query 193877 -TGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCC 193935 ||| |||||| | || | || |||||| || || || |||||| |||| ||| | Sbjct 11341 CTGT-GCAAAGCTCTACGCGTACTGGATCGTCGTCAACTACCGTGAGGCATACGGAATGT 11399 Query 193936 ACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAA 193995 ||| | |||||| || ||||||||||| ||| | | || |||||| || | Sbjct 11400 TCGCGTGCAATGGTATCCTGTTCAATCACGAGAGTCCTCGTCGCGGAAGGACATTCGTGA 11459 Query 193996 CTCGTAAGATTACACAAGGTTTAT-CTAAGATCTCTGTTGGATTACAGAAGATTCTTTAT 194054 | || ||||| | || || | | | ||||| | || ||| | || ||| Sbjct 11460 CGCGAAAGATCTC-CAGGGCCGCTGCAGATATCTCCTTGGGCAAGCAGTCGTGCCTGTAT 11518 Query 194055 CTTGGTAATCTTAATGCTAAGAGGGATTGGGGACA 194089 ||||| || ||| |||| || | ||||||||||| Sbjct 11519 CTTGGGAACCTTGATGCACAGCGCGATTGGGGACA 11553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807437650246200