Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq168 122 9e-23 seq331 86.0 7e-12 >seq168 Length=158170 Score = 122 bits (134), Expect = 9e-23 Identities = 177/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532 || || |||||||| |||| |||||||| | ||| || | ||| || ||||| || Sbjct 52987 AAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGTA 53046 Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAG 21592 | || ||||| || || | ||| || | ||| || ||||||||||| | ||| || ||| Sbjct 53047 AGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAAG 53106 Query 21593 AAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCC 21652 ||||| ||||| || ||||| || ||||| | ||||| || |||| |||| ||||| Sbjct 53107 AAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATCT 53166 Query 21653 AATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCT 21712 | ||||| | ||||||| |||||| || || ||| ||| || || || || Sbjct 53167 GAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGCA 53226 Query 21713 TTTAAAAGAT 21722 | || |||| Sbjct 53227 TCAAAGAGAT 53236 >seq331 Length=21972 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 21517 TTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGC 21576 ||| || ||||| ||| || ||||| ||||||| ||||| ||||||||||| || || Sbjct 15720 TTCGTTCGAAAAGCATAATCCTGGCATCAATCCTCGTTTTTTCAACCAAAATATAGATGC 15661 Query 21577 AAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGT 21628 || | | |||||| ||||| |||||||| || || ||||| | ||| ||| Sbjct 15660 GAAGGATGATGAAAAAAAAATCCCCTCAACCGCTGCGAATGCTAGTAAGCGT 15609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531823375189800