Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5512 120 8e-22 seq168 87.8 5e-12 >seq5512 Length=8717 Score = 120 bits (132), Expect = 8e-22 Identities = 246/366 (67%), Gaps = 0/366 (0%) Strand=Plus/Plus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 |||||| |||||||| |||| || || || | | |||||| || || || || || Sbjct 6103 CAAGTCGAACCAGCAAAACCTCGGGACCATCAAATCGTCCAACCTCTGCACTGAAATCAT 6162 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||| || |||| || ||||| || || |||||||| || || | || ||||| | Sbjct 6163 CGAATATTCCTCTCCTGATGAGACGGCTGTCTGTAACCTGGCTTCTTTAGCTCTTCCCAC 6222 Query 364314 GTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || | | | |||| | | || |||| | ||| |||| || ||| | || | | Sbjct 6223 CTTCATCACAAATGGCAAGTACGATTTCCAGAAACTTCATGATGTCACCAAGGTTGTTGC 6282 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | ||| ||| | | |||||| || ||||| || || || ||||| || || Sbjct 6283 CTACAACCTCAATCGCATCATCGACGTCAACTATTACCCTATCCCCGAAGCTCGCCGATC 6342 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || |||||||| ||||| || ||| |||||||||| || ||||| ||| ||| ||| Sbjct 6343 GAACATGCGTCACCGCCCCATCGGTGTTGGTGTACAAGGTCTCGCCGACACTTTCATGGC 6402 Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 ||| | ||| | || ||||| | | || | || |||| | ||||||||||| Sbjct 6403 GCTTCATATGCCCTTCGATTCTGCCGCTGCCAAGGAACTTAATATTCAAATCTTTGAAAC 6462 Query 364554 AATGTA 364559 ||| || Sbjct 6463 AATATA 6468 >seq168 Length=158170 Score = 87.8 bits (96), Expect = 5e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 22481 CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCAT 22540 |||| | ||||| || |||| || |||| || || || |||||||| |||||| | | Sbjct 53152 CATTTGGCGAACGCCTCGTTGCGTTCGCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGT 53093 Query 22541 TTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATG 22600 || ||||||| ||| | || || |||| | ||||| || || || ||||| || | Sbjct 53092 TTGCGTCAATCTTCTGGATGAAGAAGCGTGGCTTGATGCCTGGACTTACTTTTTCCAACG 53033 Query 22601 AGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 | | || || || ||||| || | || |||||||||||||| Sbjct 53032 AACTTATCAGTCGTGATGAAGGCATGCACACCGATTTTGCGTG 52990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303159137606390