Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2477 122 8e-23 seq1364 107 2e-18 seq142 98.7 9e-16 >seq2477 Length=31422 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||||||||||| || ||||||||||| Sbjct 19489 CCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAG 19430 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| || || |||||||| || || | || || ||||||||||| ||||| Sbjct 19429 AGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGA 19370 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | || |||| ||||||| Sbjct 19369 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 19310 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || || || |||||||| Sbjct 19309 TCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | ||| |||||||| ||||||||||| || | ||| ||| |||||| || || Sbjct 18905 ATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTG 18846 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 || || ||| |||| ||||| |||||||| || ||||| ||||||||||| ||| || Sbjct 18845 TTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTT 18786 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 ||| | | || | || || | |||||| | || | || | ||| || || || Sbjct 18785 GGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGT 18726 Query 131211 TAGAGTTTTTACGAAAATCTGCAT 131234 || || || ||||| |||||||| Sbjct 18725 GAGGGTCTTGACGAAGATCTGCAT 18702 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| |||||||| ||||| | || || |||||| ||||||||||| Sbjct 19182 GTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCA 19123 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| |||||||||||||| || || || || || ||||| ||| || |||| Sbjct 19122 GCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTG 19063 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||||| || | ||||| ||| || || || || || Sbjct 19062 ACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTCAGGGTC 19003 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 19002 TTGACGAAGATTTGCAT 18986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 ||| || || |||||||| || | |||||| ||||| ||||||||||| || | Sbjct 19682 CTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCAAA 19623 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||| ||||| || ||||| || || ||||| || ||| ||||| | Sbjct 19622 GATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 19563 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||||| || | ||| | ||| || ||||| || || || || Sbjct 19562 GTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGTGAGGGTCTTGAC 19503 Query 131223 GAAAATCTGCAT 131234 ||| |||||||| Sbjct 19502 GAATATCTGCAT 19491 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | || | ||||||||||| ||||| |||||||| | ||||||| Sbjct 18688 CGCAGGACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGCCCA 18629 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| |||||||| || ||| |||| ||||||||||| || || ||||| Sbjct 18628 TCCTCGAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGATCAGGGGGGAT 18579 >seq1364 Length=53523 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||||||||||||||| || | || || ||||| | |||||| || ||| | Sbjct 5202 CTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAACTGCTTCCCCGCGAA 5261 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 || | ||||| || || ||||| || || ||||| || ||||||| ||| | | Sbjct 5262 TATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTTTCGCCTTCACGTT 5321 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||||| ||||| | || | ||| | |||||| ||||||||||| || || Sbjct 5322 GTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCGGTTAGAGTCTTCAC 5381 Query 131223 GAAAATCTGCAT 131234 |||||||||||| Sbjct 5382 GAAAATCTGCAT 5393 >seq142 Length=14559 Score = 98.7 bits (108), Expect = 9e-16 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| ||||||||||| |||||||| ||||| Sbjct 5197 CCACCACGGAGACGGAGGACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTG 5256 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | || ||||| || || ||| Sbjct 5257 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCGGGGGGG 5316 Query 131128 ATTC 131131 |||| Sbjct 5317 ATTC 5320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471944092636800