Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq124 140 2e-28 seq1364 114 9e-21 seq2477 86.0 4e-12 >seq124 Length=8428 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 6178 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 6237 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 6238 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6272 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 8184 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 8243 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 8244 GCCAATATTTAGCTTTA 8260 >seq1364 Length=53523 Score = 114 bits (126), Expect = 9e-21 Identities = 152/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 38109 ACCAA-ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||| |||||| ||||||||||||||||| ||||| ||||| | | |||| | || || Sbjct 5184 ACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTC 5243 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 || || || || || ||||| ||||| |||||||| | || | || ||||| || Sbjct 5244 CAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTG 5303 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 ||||| |||||| || | || ||||| | ||||| || | || || ||||| Sbjct 5304 GATTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTT 5363 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || |||||||| |||||||| Sbjct 5364 CCCGGTTAGAGTCTTCACGAAAATCTGCAT 5393 >seq2477 Length=31422 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 |||||| ||||| ||||| ||||| | ||| |||| || | |||||| || || || Sbjct 18893 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCAGCGAA 18834 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || | ||||| || || | ||||| |||||||||||| || || ||||||||| Sbjct 18833 GATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATT 18774 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | | || || ||||| || || || || || || ||||| | ||| || || Sbjct 18773 ATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 18714 Query 38306 GAATATCTGCAT 38317 ||| |||||||| Sbjct 18713 GAAGATCTGCAT 18702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334899663141995