Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq168 152 6e-32 seq332 87.8 2e-12 >seq168 Length=158170 Score = 152 bits (168), Expect = 6e-32 Identities = 377/567 (66%), Gaps = 15/567 (3%) Strand=Plus/Plus Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAAT 93145 |||||||||||| ||||| || | ||||| || || ||||| | || ||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATA--AGTTCGTTGGAAAAA 53043 Query 93146 GTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaa 93205 || | || || | || || || ||||| | ||| || ||||| ||||| ||||| Sbjct 53044 GTAAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAG 53103 Query 93206 aaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA 93265 || || ||||| || || || || || || || | |||||| |||| ||| ||| Sbjct 53104 AAGAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTG----ATTT 53159 Query 93266 CT--GCTG--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 || ||| ||||| | | ||||| || || || ||| || ||||| | || || Sbjct 53160 CTTATCTGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTC 53219 Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381 ||| || | ||| || || || |||| | ||| || || || ||||| | || Sbjct 53220 GATGGCATCAAAGAGATATTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAG 53279 Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441 ||||| ||| ||||||| |||||||| |||||||| || |||||||| | || Sbjct 53280 CGAATAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGC 53339 Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 || | | || ||||| | ||||| ||||| | || || || ||||| |||||||| Sbjct 53340 CTCGGCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATC 53399 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTC---ATCATCTTTAAG 93558 || || || || ||||| | | ||| || ||||| ||| |||| | | | Sbjct 53400 AGAGGCAGCGAAGAAAGCAAGAACGTGCGAGATGAAATGACGCTCGTTGTCATTTAGACG 53459 Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 || ||| ||| | |||||| || || || | || || ||||||| || || || Sbjct 53460 GTTGGTCCAGTCGTGGATATCTTTGGAGAGGTCCATCTCCTCCGCAGTCCAGAAAGACGC 53519 Query 93619 TTCTGCTTTTTTGTACATATCCCATAT 93645 || || || |||||||| | ||| || Sbjct 53520 CTCAGCCTTCTTGTACATTTGCCAGAT 53546 >seq332 Length=22363 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 93094 CGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACC 93153 |||||| ||||| || | |||||||| || || || | ||| || || ||| || Sbjct 1930 CGCAAATTCGGTGTGAAGTCCTTCGTCCCGAGAGATAAGCTCGTTCGAAAAACATAATCC 1989 Query 93154 TGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA-GaaaaaaaTA 93212 ||| | ||||||||||||||| | |||||| ||||| || ||| || | |||||||| | Sbjct 1990 TGGCATCAGTCCTCGTTTCTTCAACCAAAAAATTGATGC-AAAGGACGATGAAAAAAAAA 2048 Query 93213 TACCTTCCACGGCTGCAAATGC 93234 | || || || ||||| ||||| Sbjct 2049 TTCCCTCGACTGCTGCGAATGC 2070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556779741949800