Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq168 109 1e-18 seq833 93.3 9e-14 >seq168 Length=158170 Score = 109 bits (120), Expect = 1e-18 Identities = 354/543 (65%), Gaps = 19/543 (3%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| || || || |||||||| | |||||||| | | || |||||||||| || Sbjct 53004 GTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGTAAGTCCAGGCATCAAGCC 53063 Query 251904 ACGGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACAC 251962 ||| ||| | | ||||||||||| ||| ||| ||||||||||| | | |||||| ||| Sbjct 53064 ACGCTTCTTCATCCAGAAGATTGACGC-AAACGATCCAGAGAAGAAAATACCCTCTACAG 53122 Query 251963 ACACCCATGCAACAAGGCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTG 252019 | | ||||| ||||| || |||| || || | | || | ||| | | Sbjct 53123 CAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATCTGAAATCCACTCAAGGG 53182 Query 252020 CCCATGCTGCCTT---CTT--TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGA 252074 ||||| ||||||| ||| | ||| || || || ||||| |||||||||||| | Sbjct 53183 CCCATTCTGCCTTGCGCTTGATGCAA-----GGAATCGTCTCGATGGCATCAAAGAGATA 53237 Query 252075 GTTCCGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATG 252134 | |||| | | | |||| ||| | || | || || || || || ||||| Sbjct 53238 TTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGAATAGGCTTCGGAATG 53297 Query 252135 GATGGATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTC 252194 |||| || | | || ||| | ||||||| ||||| | | |||||| Sbjct 53298 GATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTCGGCAACTTGGACTTC 53357 Query 252195 CGTGGAAAAGTTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCC 252254 | ||||| | | || |||||| | || || ||||| | | || ||||| | Sbjct 53358 ATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAGC 53417 Query 252255 AAGAATGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAAT 252314 ||||| | | |||||| |||||||| | ||| || || || ||||||| || Sbjct 53418 AAGAACGTGCGAGATGAAATGACGCTCGTTGTCATTTAGACGGTTGGTCCAGTCGTGGAT 53477 Query 252315 GTCCTGATTCAGAGGAACTTCT--TCCACCGTCCAGAATGTGGACACCGCCTTCTTGTAC 252372 || | | ||||| | ||| ||| | |||||||| | | | | |||||||||||| Sbjct 53478 ATCTT--TGGAGAGGTCCATCTCCTCCGCAGTCCAGAAAGACGCCTCAGCCTTCTTGTAC 53535 Query 252373 ATT 252375 ||| Sbjct 53536 ATT 53538 Score = 93.3 bits (102), Expect = 9e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 || || || ||||| ||| |||||||| | || |||| || || || | |||||| Sbjct 52651 TAATCGGAAACACGCTTTTCAAAGAAATTCGTTTTCCCCTGGAGTGAAATCATGTCCATG 52710 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 ||||||||||| || || | ||||||| |||| | ||| || || || | | ||| Sbjct 52711 AAGTCGAAGGGATTCGTCGAATTGTACACCTTGTCGTTGCCCAGAGCGACAAGTAGTCGG 52770 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACA 251723 || || || ||||| | ||||| | ||||| ||||| |||||||| || | | ||| Sbjct 52771 TCGGCAACGAACTCGATGTACTGGCACATCAAGTCAGAATTCATGCCGATGAGTTTGAC- 52829 Query 251724 AGGAATTGCCTCACAGAT 251741 ||||| ||| || |||| Sbjct 52830 AGGAAGTGCGTCTAAGAT 52847 >seq833 Length=11641 Score = 93.3 bits (102), Expect = 9e-14 Identities = 128/177 (72%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || ||| ||| | |||||||| ||| | || ||||| ||||| || | |||| Sbjct 4471 CTCTCGCGTTGCTGTTTTGGGACCCAACGGTTCCGGCAAGTCAACCCTCGTCCGACTCCT 4530 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGAT 280276 | ||||| | || ||| |||| || | | |||||||| |||||| || || Sbjct 4531 CATCGGCGACATGGAGCCCAACAAGGGTGGTGAGATCTGGAAGCACCCCAACTTGGTCAT 4590 Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCC 280333 | |||||||||||||||||| ||||||||||| || |||| || |||| ||| || Sbjct 4591 CGGTTACGTCGCTCAGCACGCATTCCACCACATTGATCACCATCTTGACAAGACCCC 4647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027683445143445