Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1314 197 3e-45 seq2477 187 5e-42 seq1364 149 1e-30 >seq1314 Length=22516 Score = 197 bits (218), Expect = 3e-45 Identities = 352/511 (69%), Gaps = 2/511 (0%) Strand=Plus/Minus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| ||||||||||||| ||| || | |||||| || ||||||| ||||||||| | Sbjct 11555 CATGTCCCCAATCGCGCTGTGCATCAAGGTTCCCAAGATACAGGCACGACTGCTTGCCCA 11496 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403 | |||| | | | ||| ||||| |||||||| ||| || || ||| Sbjct 11495 AGGAGATATCTGCAGCGGCCCTGGAGATCTTTCGCGTCACGAATGTCCTTCCGCGACGAG 11436 Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463 | |||||||| ||||| ||||| || |||||||||||||| || |||||||||||||||| Sbjct 11435 GACTCTCGTGATTGAACAGGATACCATTGCACGCGAACATTCCGTATGCCTCACGGTAGT 11376 Query 268464 TCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGG 268523 | ||||| ||||||| || | | ||||||| | || || || || |||| ||| | Sbjct 11375 TGACGACGATCCAGTACGCGTAGAGCTTTGCACAGCCATAAGGGGATCGGGGATAGAATG 11316 Query 268524 GCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTT 268583 | ||||| | || ||| | || || |||||| | ||||| || ||||| || | Sbjct 11315 GTGTCGTTTCGCTCTGGGGGGTCTCCACCACCTTGCCATACAGCTCCGATGTCGACGCCT 11256 Query 268584 GGTAGAACTTTGTTGT-TTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642 | |||||| ||| || || || | || || | |||| || || || | || ||| Sbjct 11255 GATAGAAC-TTGACGTGCTTCTCCAAGCCACAAGTGCGGACGGCATCAAGGAGGCGTAGA 11197 Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702 || || | ||| || ||||| | || || || | ||| ||||| || || | ||| || Sbjct 11196 GTACCAAGGCCGTCAACGTCTCCGGTGTATTCGGCCATTTCGAAAGAAACTTTGACGTGC 11137 Query 268703 CTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGG 268762 || ||||| || || || | ||| |||| |||||| | ||| | || || Sbjct 11136 GATTGCGCGCCGAGATTGTAGATCTCGGTAGGTTGGACCTGGGCGATGATATAGACAAGA 11077 Query 268763 TTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 || || ||| | ||||| ||||| |||| Sbjct 11076 TTGGTGCTGTCACTCAGGTCGCCGTAATGCA 11046 >seq2477 Length=31422 Score = 187 bits (206), Expect = 5e-42 Identities = 166/208 (80%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 ||||||| || ||| |||||| |||||||| || || ||||| || | ||||| || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || | ||||||||||| || ||||| |||||||| |||| Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||||||||| ||||| ||||| | || || || |||| ||||||||| || | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||||||||||||||||||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || ||||| || |||||||| ||||| ||| Sbjct 19489 CCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAG 19430 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| ||||||||| | |||||||||||| || || | | || |||||||| ||| Sbjct 19429 AGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGA 19370 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| ||||| ||||||||| ||||| ||||| | || || || Sbjct 19369 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 19310 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| || || ||||| |||||||| || |||||||| Sbjct 19309 TCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 167 bits (184), Expect = 4e-36 Identities = 165/212 (78%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 68251 ATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||| || || || || ||||| || || ||||||||||| || || || | || || Sbjct 19197 ATACCCAGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCC 19138 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | |||||| || || || || | | || |||||||| ||||| || |||||||| Sbjct 19137 TCGAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 19078 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || ||||| |||||||| ||||||||||||| || || ||||||||||| ||||| Sbjct 19077 TGGATCTTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTC 19018 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| |||||||||||||| || ||||| Sbjct 19017 TTTCCCGTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 152 bits (168), Expect = 9e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || ||||| || || ||||| || || ||||| || | ||| || || | || Sbjct 18904 TGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGT 18845 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 ||||| ||||| || | | ||| ||||| || || |||||||| |||||||| ||||| Sbjct 18844 TTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTG 18785 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| || || || ||||| | || || || ||||| |||||||| || |||||| Sbjct 18784 GCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTG 18725 Query 68439 AGGGTCTTGACGAATATCTGCATT 68462 |||||||||||||| ||||||||| Sbjct 18724 AGGGTCTTGACGAAGATCTGCATT 18701 >seq1364 Length=53523 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || ||| ||| ||||| ||||| || || || || || | ||||| | Sbjct 5183 TACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCT 5242 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | ||||||||||| |||||||| || | ||||| || || ||||| || || || |||| Sbjct 5243 CCAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTT 5302 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 | || || ||||| ||| |||||||| || | || || || || | ||||||||||| Sbjct 5303 GGATTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTT 5362 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || || || ||||| ||||| ||||||||| Sbjct 5363 TCCCGGTTAGAGTCTTCACGAAAATCTGCATT 5394 Score = 89.7 bits (98), Expect = 9e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | || | ||| || || |||||||| || |||||||||||||| Sbjct 5905 CCACCCCGAAGGCGAAGAACAAGGTGGAGGGTTGACTCTTTCTGTATGTTATAATCGGAT 5964 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | |||| |||||||| | ||||||||||| || || | | ||| || |||||||| Sbjct 5965 AAAGTCCGACCATCTTCGAGTTGCTTCCCGGCAAAAATCAAACGTTGCTGATCGGGTGGG 6024 Query 68355 AT 68356 || Sbjct 6025 AT 6026 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || || |||||||| ||||| ||||| || || || || |||| || || || ||| Sbjct 5800 CCCTCTTTGTCTTGGATCTTGGCCTTAACATTGTCTATCGTATCTGAAGACTCAACCTCC 5859 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct 5860 AGGGTAATTGTTTTACCCGTGAGGGTTTTGACGAATATTTGCAT 5903 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 |||||||||||||| || || |||||||| || ||||| || | ||||| || || Sbjct 6081 CCTTCCTTGTCTTGGATTTTGGCCTTGACATTATCAATGGTATCAGAAGATTCGACCTCA 6140 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || ||||| || |||||||| || || |||||||| Sbjct 6141 AGGGTGATCGTCTTTCCAGTAAGGGTCTTCACAAAGATCTGCAT 6184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921488246339400