Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq168 165 2e-35 seq5512 89.7 1e-12 >seq168 Length=158170 Score = 165 bits (182), Expect = 2e-35 Identities = 393/587 (67%), Gaps = 14/587 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| || |||||||| ||||| Sbjct 53546 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCTTTCTGGACTGCGGAGGAGATGGACCTC 53487 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCT----GAGAACGAAAAGTTTTTCCTCAA 42415 |||| || | || |||| | || |||| || ||||| |||| || Sbjct 53486 TCCAAAGATATCCACGACTGG-ACCAACCGTCTAAATGACAACGAGCGTCATTTCATCTC 53428 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || || |||||||| |||||||| || || ||||| |||||||| || Sbjct 53427 GCACGTTCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTTCTGGAGAG 53368 Query 42476 GTTCATGAAAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCC 42533 ||| || || || || | || ||||||||||| ||||| |||||||| || Sbjct 53367 GTTTTCAAATGAAGTCCA--AGTTGCCGAGGCGCGCTGTTTCTATGGCTTCCAAATCATG 53310 Query 42534 ATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCC 42593 || |||||| | || || || | || | || || |||| || ||| |||| | Sbjct 53309 ATGGAGAACATCCATTCCGAAGCCTATTCGCTTCTCATCGACACTTATATCAAGGATGCT 53250 Query 42594 GTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCG 42653 ||||| | || || | ||||| |||||||| || ||||||||| ||||| Sbjct 53249 ACTCAGCGTGAATATCTCTTTGATGCCATCGAGACGATTCCTTGCATCAAGCGCAAGGCA 53190 Query 42654 GACTGGGCGCTCAACTGGA-TCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 || ||||| || | |||| | ||| | | |||| || ||||| | || || || Sbjct 53189 GAATGGGCCCTTGAGTGGATTTCAGA-TAAGAAATCAACATTTGGCGAACGCCTCGTTGC 53131 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 || | || || ||||| || |||||||| || | || || || ||||||||| | || Sbjct 53130 GTTCGCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGTTTGCGTCAATCTTCTGGATGAA 53071 Query 42773 GCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGG 42832 | || | | |||||| ||||| || || || |||||||| ||||| | || || || Sbjct 53070 GAAGCGTGGCTTGATGCCTGGACTTACTTTTTCCAACGAACTTATCAGTCGTGATGAAGG 53011 Query 42833 GCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 |||| | || ||||| ||| | || ||| |||||||||| || Sbjct 53010 CATGCACACCGATTTTGCGTGCTTACTCTTC---AGCCACCTCAAGC 52967 >seq5512 Length=8717 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 || ||||| |||||||| | || | |||||| ||||||| | ||| ||| |||| Sbjct 5779 AAAAGGTCAGGGATCCACAAAGCGTAGAAGAGATCCCTGGCACGAGACTCTTCCTTGCCA 5720 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 ||||| | ||| || | || |||| || || | ||||| || || ||||||| Sbjct 5719 TGATTCTTTCGCAGGTCGAGGAAATCAAGAACATCAGCATGCCAAGGTTCGATGTAGATG 5660 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTT 245190 |||| || || |||||||| ||||||||||||| || | | ||||| || | Sbjct 5659 GCGAACGCTCCAGGCCGCTTATTGCCTCCCTGGT----CAACGTAACGAGCAGTAGCATC 5604 Query 245191 GAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238 | | |||||| | ||||| || ||||| || | ||| ||||| || Sbjct 5603 GTACGCGCGCAGCATCGGCACAATACCGTTGGAATAGCCATTGGTTCC 5556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944201739625200