Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2477 134 1e-26 seq1364 86.0 6e-12 >seq2477 Length=31422 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| ||||| || || || ||||||||||| | || ||| ||| | ||| Sbjct 19474 AGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCT 19415 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| |||||| |||| | |||||||||||||||||||||||||| || ||| Sbjct 19414 TCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCT 19355 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | ||| | |||| Sbjct 19354 TGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTC 19295 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | ||| || || || || ||||| Sbjct 19294 TTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | ||||| || || |||||||| ||||| | | || || |||| || ||| Sbjct 19191 AGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGC 19132 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| ||| | || | |||||||||||||| ||||| || || || || || || Sbjct 19131 TGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATC 19072 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| ||| || | || || | || ||||| | || | |||||| || Sbjct 19071 TTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCC 19012 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || || ||||| |||||||| Sbjct 19011 GTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | || || || || ||||||||||| || | || ||| ||| |||| || || Sbjct 18907 AGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGT 18848 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 || || || || | || | || |||||||| || || || |||||||| ||||| || Sbjct 18847 TGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATC 18788 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| ||| || | || ||| || || || || | ||| | ||||||||| Sbjct 18787 TTGGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCC 18728 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || || ||||| || |||||| Sbjct 18727 GTGAGGGTCTTGACGAAGATCTGCATT 18701 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 ||||| || |||||||| || | || |||||| | || || ||||||||||| ||| | Sbjct 19681 TCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAG 19622 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||| |||||||| || || || || || || || || || ||| || Sbjct 19621 ATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 19562 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || ||| | || || || | || | |||||| ||||| | || || ||| Sbjct 19561 TCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACG 19502 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 19501 AATATCTGCAT 19491 >seq1364 Length=53523 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || |||||||| || || | | ||||| | || Sbjct 5410 AGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCATCC 5469 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || || | ||||| || |||||||| || ||||||||||| || || Sbjct 5470 TCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCC 5529 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| | || ||||| | || | || Sbjct 5530 TGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTT 5589 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| ||||| || || || ||||| Sbjct 5590 TTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499572070453800