Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2477 93.3 4e-14 seq1364 89.7 5e-13 seq8065 84.2 2e-11 >seq2477 Length=31422 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| | |||||| ||||||||||||||| || | Sbjct 18895 GACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCAGCG 18836 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||| || ||||| || || || ||||||||||| ||| || || | Sbjct 18835 AAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACA 18776 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||| | || | || || || || || || || Sbjct 18775 TTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTG 18716 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 18715 ACGAAGATCTGCAT 18702 >seq1364 Length=53523 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 ||||||||||||||||||||| | |||||| ||||| | || || || | | Sbjct 5202 CTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAACTGCTTCCCCGCGAA 5261 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || || |||||||| || ||||| || || ||||| || |||||| || | | Sbjct 5262 TATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTTTCGCCTTCACGTT 5321 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||| |||| ||||| ||||| | || | ||||| || || ||||| || || Sbjct 5322 GTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCGGTTAGAGTCTTCAC 5381 Query 138603 AAAAATCTGCAT 138614 ||||||||||| Sbjct 5382 GAAAATCTGCAT 5393 >seq8065 Length=1823 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||| ||| ||| | || ||| ||||||||||||| || ||||| ||| || ||||| Sbjct 1630 ATGAATGGTTGCCCCCCGTTGGATGTTGTAGTCGCCCAAGGTACGTCCGTCTTCAAGTTG 1689 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||| ||| | |||| || | ||||| || ||||| ||||| || ||||| || || Sbjct 1690 TTTTCCGTCAAAGATAAGTCTTTGTTGATCAGGAGGAATACCCTCCTTGTC-TTGTATTC 1748 Query 138531 TTGT-TTTAATTGTTCCACGGTGTCGGTCGACT 138562 ||| || | | |||||| ||||||| ||||| Sbjct 1749 GTGTCTTCACGTCTTCCACAGTGTCGGACGACT 1781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496190162804400