Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2477 111 1e-19 seq1364 100 3e-16 >seq2477 Length=31422 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || || ||||| ||||| || ||||| || ||| ||| || Sbjct 19471 ACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCTTCG 19412 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || || || | ||||| || |||||||| || ||||| ||||| || ||||| Sbjct 19411 AGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCTTGG 19352 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | || | ||||||||||||||||| || ||||| | || || Sbjct 19351 ATCTTAGCCTTGA-CGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTCTT 19293 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| ||||| || ||||| || ||||| Sbjct 19292 GCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 >seq1364 Length=53523 Score = 100 bits (110), Expect = 3e-16 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||| || || || ||| |||||| || || || || || ||||| || ||||| Sbjct 5238 ATCCTCCAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTT 5297 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 |||||| ||||| || | || | || | ||| ||||||||||| || || || || | Sbjct 5298 ATCTTGGATTTTCGCCTTCA-CGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGA 5356 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||||||||| || || ||||| ||||| Sbjct 5357 TGGTTTTCCCGGTTAGAGTCTTCACGAAAATCTGCAT 5393 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | || ||||| | || |||||||| || || ||||| || Sbjct 5392 ATTCCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCA 5451 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| |||| ||| ||||| ||| | || | ||||||||||| || Sbjct 5452 GATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGG 5511 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| ||||| || || || || | |||| || || || || || Sbjct 5512 GGAATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCA 5571 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | |||||| || || | ||||| ||||| || ||||| Sbjct 5572 ACTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451937405284200