Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2477 132 1e-25 seq1364 107 5e-18 seq142 87.8 4e-12 >seq2477 Length=31422 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || || || ||||||||||| |||| |||||| || | | ||| Sbjct 19483 CGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTC 19424 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| ||||| || || | ||||||||||| ||| ||||||| Sbjct 19423 CGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCT 19364 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| ||||| | | || || |||| Sbjct 19363 TCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGA 19304 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || ||||| || || Sbjct 19303 GTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTG 19266 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || ||||| ||||||||||| || | ||| || || | | ||| | || || || ||| Sbjct 19191 AGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGC 19132 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || ||||| | |||||||||||| || ||| || || ||||| ||| Sbjct 19131 TGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATC 19072 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| || |||| |||||||| | || || ||||| || || ||||| ||| Sbjct 19071 TTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCC 19012 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| Sbjct 19011 GTCAGGGTCTTGACGAAGATTTG 18989 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || ||||| || |||||||| || | ||||||||||| | || | || || || || Sbjct 18907 AGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGT 18848 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 || || || |||||||| | ||| |||||||| || || |||||| || || ||| Sbjct 18847 TGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATC 18788 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || |||||| || | ||||| | | || || ||||| ||||| ||||| ||| Sbjct 18787 TTGGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCC 18728 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || Sbjct 18727 GTGAGGGTCTTGACGAAGATCTG 18705 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| ||| || |||| ||||||||| | | || | ||||| || ||||| Sbjct 19694 GTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTG 19635 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || ||||| |||||||| ||||| || || || || ||||||||||| Sbjct 19634 CTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 19575 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| |||| ||||| | | || || |||| ||||| ||||| || || Sbjct 19574 CGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGT 19515 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || || Sbjct 19514 GAGGGTCTTGACGAATATCTG 19494 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| |||||||||||||| || | ||||| |||| | || | ||||| Sbjct 18686 CAGGACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGCCCATC 18627 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| | ||||||||| || || Sbjct 18626 CTCGAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGATCAGG 18585 >seq1364 Length=53523 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || ||||| || | ||| ||||||| | ||| | ||||| ||||| |||||||| Sbjct 5425 GTAGATTCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCATCCTCCAGTTGCTTTCCA 5484 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||||||||| || |||||||| || ||||||||| ||||| ||||| |||| Sbjct 5485 GCGAAGATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTCGCCTTC 5544 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || || | || || | || ||| || || | |||||||| || || || | ||| Sbjct 5545 ACATTGTCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTTTTCCCAGTCAACGTT 5604 Query 199613 TTCACAAAAATTTG 199626 || ||||| || || Sbjct 5605 TTGACAAAGATCTG 5618 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || || ||||||||| | ||||||||||| | ||| | |||||| |||| Sbjct 5186 CAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCA 5245 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 |||||| || ||||| || || ||||| || || ||| ||| || ||| || || | Sbjct 5246 ACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGA 5305 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 | || ||||||| |||| ||| || | | || || || | ||||| || || | Sbjct 5306 TTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCC 5365 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || ||||| ||||| ||||| || Sbjct 5366 CGGTTAGAGTCTTCACGAAAATCTG 5390 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||| || || | |||||| |||| ||| || | ||||| Sbjct 5638 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAAGGTTCGACCATCC 5697 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||| ||||| |||||||| ||||| || ||||| || Sbjct 5698 TCGAGCTGTTTTCCAGCGAAGATAAGACGTTGTTGGTCAGG 5738 >seq142 Length=14559 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || ||||||||||||| ||||||||| | || | ||||| Sbjct 5212 AGGACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCC 5271 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| ||||||||||| || || ||||| || || Sbjct 5272 TCCAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCGGG 5312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178745703055215