Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq168 217 1e-51 seq2477 116 4e-21 seq1364 109 5e-19 seq142 91.5 1e-13 >seq168 Length=158170 Score = 217 bits (240), Expect = 1e-51 Identities = 390/565 (69%), Gaps = 15/565 (3%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| | ||||| ||||| ||| |||| ||| || || | || ||||||||| Sbjct 52979 TGAAGAGTAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGG 53038 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||||| | || ||||| | ||| || || || | ||| || || | || || | Sbjct 53039 AAAAAGTAAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATC 53098 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||| | ||||| || || ||||| || || ||||| ||||| || || | || Sbjct 53099 CAGAGAAGAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATT 53158 Query 133064 -CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 ||| ||| ||||| || |||||||| ||||| |||| ||| || ||||| Sbjct 53159 TCTTATCTGAA-ATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTC 53217 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGT-----AGGTGTCGA 133177 |||||||| | |||| || ||| | | ||| | | | | | ||||||| Sbjct 53218 TCGATGGCAT----CAAAGAGATATTCACG-CTGAGTAGCATCCTTGATATAAGTGTCGA 53272 Query 133178 TGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGC 133237 |||| |||||| ||| || || | ||||||||| |||||| ||||| || || | Sbjct 53273 TGAGAAGCGAATAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAAC 53332 Query 133238 ACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGA 133297 | ||||||||| | || || ||||| | | || | ||| | || || |||||||| | Sbjct 53333 AGCGCGCCTCGGCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAA 53392 Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357 | || || ||| ||||| || || || |||||| ||||||||| ||||||||||| | Sbjct 53393 TACCATCAGAGGCAGCGAAGAAAGCAAGAACGTGCGAGATGAAATGACGCTCGTTGTCAT 53452 Query 133358 TCAAGCGCT---CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414 | | || | ||||||| | | || ||||| ||||||| |||||| | ||||| | Sbjct 53453 TTAGACGGTTGGTCCAGTCGTGGATATCTTTGGAGAGGTCCATCTCCTCCGCAGTCCAGA 53512 Query 133415 ACGACGCCTCGGCTTTTTTGTACAT 133439 | |||||||| || || |||||||| Sbjct 53513 AAGACGCCTCAGCCTTCTTGTACAT 53537 >seq2477 Length=31422 Score = 116 bits (128), Expect = 4e-21 Identities = 155/210 (74%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || || ||||| || || ||||||||| | || |||||| | | Sbjct 19491 ATGCAGATATTCGTCAAGACCCTCACCGGGAAGACCATCACCCTGGAGGTCGAGTCGTCT 19550 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || ||| ||||||| Sbjct 19551 GACACGATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 19609 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | || ||||| ||||| || || | ||||||||| |||||||| Sbjct 19610 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTCTCGGACTACAA 19669 Query 38423 CATCCA-AAAGGAAGCGACGCTGCATTTGG 38451 |||||| |||| ||| || || || |||| Sbjct 19670 CATCCAGAAAGAGAGC-ACTCTTCACTTGG 19698 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| |||||||| | || |||||| | || Sbjct 19263 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGTCTTCC 19322 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || |||||||| ||||||| Sbjct 19323 GACACGATCGACAACG-TCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGACCA 19381 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| || || || ||||| || || | ||| |||||| || ||||| Sbjct 19382 GCAGCGCTTGATTTTTGCCGGGAAGCAGCTCGAAGATGGGCGGACCCTCTCGGATTACAA 19441 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| || ||| | || || ||| Sbjct 19442 CATCCAGAAGGAGTCGACACTTCATCTCGTCCTCCGT 19478 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||||||||| |||||||| | || || ||| || | Sbjct 18701 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTC 18760 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || || | | || | || |||| |||||||| || || ||| | |||| Sbjct 18761 TGACACGATTGATAATG-TGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACC 18819 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | ||| || ||||| || || |||| ||| |||||| ||||||| Sbjct 18820 AGCAACGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACA 18879 Query 38422 ACATCCAAAAGGAAGCGACGCTGCAT 38447 |||| || ||||| | || || ||| Sbjct 18880 ACATTCAGAAGGAGTCTACCCTCCAT 18905 >seq1364 Length=53523 Score = 109 bits (120), Expect = 5e-19 Identities = 156/213 (73%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || || |||||||||||| | || || ||| | | Sbjct 5394 AATGCAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTC 5335 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | | | |||| | || | ||||||| || |||||||| ||||| | || | Sbjct 5334 CGATACCATCGACAACG-TGAAGGCGAAAATCCAAGATAAAGAGGGGATTCCTCCTGATC 5276 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || || | |||||| || ||| |||| || | || || || ||||||| Sbjct 5275 AACAGCGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACA 5216 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCAT-TTGGT 38452 |||| |||||||| ||| || || ||| ||||| Sbjct 5215 ACATTCAAAAGGAGAGC-ACCCTTCATCTTGGT 5184 >seq142 Length=14559 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||| ||| |||| || || || || || | ||| ||||| |||||||| || | |||| Sbjct 5320 GAATCCCCCCCGATCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCA 5261 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||||||||||||||||||| | || || ||| | || || ||| Sbjct 5260 CCCTCAGCGACTACAACATCCAAAAGGAGTCTACCCTTCATCTTGTCCTCCGT 5208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500099993596800