Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1364 104 9e-17 seq2477 86.0 2e-11 >seq1364 Length=53523 Score = 104 bits (114), Expect = 9e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || || || ||||| || || ||||| ||||| || || Sbjct 5394 AATGCAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTC 5335 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| || | || ||||| |||||||| || || |||||||||||||| Sbjct 5334 CGATACCATCGACAACGTGAAGGCGAAAATCCAAGATAAAGAGGGGATTCCTCCTGATCA 5275 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| || | || ||| | ||||| || | || |||||| | ||| | | || || || Sbjct 5274 ACAGCGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACAA 5215 Query 391229 TATTGATAAGGATGCAACACTTCA-CTTAGTA 391259 ||| | ||||| || ||||| ||| ||| Sbjct 5214 CATTCAAAAGGAGAGCACCCTTCATCTTGGTA 5183 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || ||||| ||||||| ||||| || || || || ||||||||||| Sbjct 5621 ATGCAGATCTTTGTCAAAACGTTGACTGGGAAAACGATCACCCTCGAAGTTGAATCATCG 5562 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || || || || ||||||||||||||||| || || || Sbjct 5561 GATACTATAGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAG 5502 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || ||| | || || ||||| || ||||| | ||| | | || ||||| Sbjct 5501 CAACGCCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACTCTATCTGACTATAAC 5442 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 5441 ATTCAGAAGGA 5431 >seq2477 Length=31422 Score = 86.0 bits (94), Expect = 2e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || || || || || || ||| | || ||||| || || Sbjct 18701 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTC 18760 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||| | | || || || ||||| || ||||| || || ||||| || Sbjct 18761 TGACACGATTGATAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 18820 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| || ||| | ||||||||||| || || || | || | | || || || Sbjct 18821 GCAACGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACAA 18880 Query 391229 TATTGATAAGGA 391240 ||| | ||||| Sbjct 18881 CATTCAGAAGGA 18892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975423619727660