Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq168 95.1 2e-14 seq332 86.0 8e-12 >seq168 Length=158170 Score = 95.1 bits (104), Expect = 2e-14 Identities = 199/290 (69%), Gaps = 10/290 (3%) Strand=Plus/Minus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| ||||| ||||||| | || || | | |||||||| |||||| | Sbjct 53276 CTCATCGACACTTATATCAAGGATGCTACTCAGCGTGAATATCTCTTTGATGCCATCGAG 53217 Query 102108 ACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTTT---GATACAAA 102163 || |||| || || ||| | ||| | || ||||| | ||||| || |||| || Sbjct 53216 ACGATTCCTTGCAT-CAAGCGCAAGGCAGAATGGGCCCTTGAGTGGATTTCAGATAAGAA 53158 Query 102164 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 || | |||| || || ||| | || || || ||| |||||||| |||||||| Sbjct 53157 ATCAA---CATTTGGCGAACGCCTCGTTGCGTTCGCTGCTGTAGAGGGTATTTTCTTCTC 53101 Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 ||| || || |||| | || | ||| | |||||||| || | ||||| || || | Sbjct 53100 TGGATCGTT-TGCGTCAATCTTCTGGATGAAGAAGCGTGGCTTGATGCCTGGACTTACTT 53042 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 | |||||||| |||||| |||||| || || | ||| || |||||| Sbjct 53041 TTTCCAACGAACTTATCAGTCGTGATGAAGGCATGCACACCGATTTTGCG 52992 >seq332 Length=22363 Score = 86.0 bits (94), Expect = 8e-12 Identities = 99/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262 || ||||| || || || || ||||| ||| | |||| |||| | ||||| ||||| Sbjct 2058 GTCGAGGGAATTTTTTTTTCATCGTCCTT-TGCATCAATTTTTTGGTTGAAGAAACGAGG 2000 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 102322 || |||||||| | || || || ||||||||||||||||| ||||| ||||| ||| Sbjct 1999 ACTGATGCCAGGATTATGTTTTTCGAACGAGCTTATCTCTCGGGACGAAGGACTTCACAC 1940 Query 102323 AGAGTTTGCGG 102333 || ||||||| Sbjct 1939 CGAATTTGCGG 1929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620652043184400