Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1235 105 5e-17 seq247 95.1 1e-13 seq1364 91.5 1e-12 seq8065 89.7 4e-12 seq585 89.7 4e-12 >seq1235 Length=84146 Score = 105 bits (116), Expect = 5e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 550021 TAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAA 550080 |||||||||||||||||||||||||| | ||||| || || ||||| || || ||||| Sbjct 69015 TAGTTGTGTTGGTGTTTGGCAAAATGATCGTGTTGAGATCATCGCCAACGACCAGGGTAA 69074 Query 550081 CAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGC 550140 | ||||||| || |||||||| || ||| | || | ||| | | | | || ||||| || Sbjct 69075 CCGAACTACCCCTTCTTATGTCTCCTTCTCCGACAGTGAGCGTCTTATCGGCGATGCCGC 69134 Query 550141 AAAATATCAAG 550151 |||| | |||| Sbjct 69135 AAAAAACCAAG 69145 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||||||||| || || || || || || || ||||| ||||| |||| Sbjct 69497 ATGCCGTTGTTACTGTACCAGCCTACTTCAACGATTCCCAGCGACAAGCCACTAAGGATG 69556 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| ||| |||| | ||||| |||||||| ||||| || || || || || || Sbjct 69557 CTGGGACTATCTCTGGCATGAATGTGCTTCGTATCATCAACGAGCCCACGGCAGCCGCCA 69616 Query 550518 TTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 | || || || ||||| || | || |||| || || |||||||||||| Sbjct 69617 TAGCCTACGGTCTTGACAAGAAGGTTGTCGGTGAACGCAACGTCCTCATCTTTGAT 69672 >seq247 Length=95329 Score = 95.1 bits (104), Expect = 1e-13 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || ||||| || || || || |||| || ||||| |||||||| || ||| Sbjct 79586 GTGCCTGCCTATTTCAACGATTCTCAGCGTCTCGCCACTAAGGATGCTGGTGCCATCGCT 79645 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 |||||| ||||||||||||| |||||||| || ||||| ||||| | || || || ||| Sbjct 79646 GGACTTGATGTTCTTCGTATCATCAATGAGCCCACTGCCGCTGCCATCGCCTACGGCCTT 79705 Query 550532 GA 550533 || Sbjct 79706 GA 79707 >seq1364 Length=53523 Score = 91.5 bits (100), Expect = 1e-12 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 ||||||||||||| || || || ||| ||||| |||| ||||| | | ||| || | Sbjct 5186 CAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCA 5245 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 || || || || || || || | || |||||||||||||| || ||||||||||| | Sbjct 5246 ACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGA 5305 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTA 563445 |||| || || || || ||||| | || | | || || || | ||||| Sbjct 5306 TTTTCGCCTTCACGTTGTCGATGGTATC-GGAAGACTCAACCTCAAGGGTGATGGTTTTC 5364 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| || |||||||| ||||| Sbjct 5365 CCGGTTAGAGTCTTCACGAAAATCTGCAT 5393 Score = 86.0 bits (94), Expect = 5e-11 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || ||||| || ||||| | ||| ||| || ||| || || |||| |||||| | Sbjct 5404 AGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAGATAGAGTGCGA 5463 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || ||||| ||||| || || || || | |||||| || || ||||||||||| Sbjct 5464 CCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCC 5523 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 ||||| || || || || || || || ||||| | ||| | | |||||| || Sbjct 5524 TTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCG-ATGATTCAACTTCGAGGGT 5582 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| | ||||| || || || ||||| Sbjct 5583 GATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 >seq8065 Length=1823 Score = 89.7 bits (98), Expect = 4e-12 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 |||||||||||||||||| |||| ||||||||||| |||||||||||||| || || || Sbjct 1679 TCTTCAAGTTGTTTTCCGTCAAAGATAAGTCTTTGTTGATCAGGAGGAATACCCTCCTTG 1738 Query 563380 TCTTGAATT 563388 ||||| ||| Sbjct 1739 TCTTGTATT 1747 >seq585 Length=70684 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || || || || || ||| | ||||| ||||| || ||||| | Sbjct 62726 ATGCCGTTATTACTGTCCCTGCTTACTTCAACGACGCCCAACGCCAAGCGACGAAAGACG 62785 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | || ||||| || | || || || | ||||||||||| || || ||||| | Sbjct 62786 CTGGTCAGATCGCTGGTCTAGACGTCCTCCGAGTCATCAATGAACCCACCGCAGCTGCCC 62845 Query 550518 TTGCATATGGACTTGAT 550534 |||| ||||| || ||| Sbjct 62846 TTGCGTATGGTCTGGAT 62862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028680159881050