Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq168 127 2e-24 seq331 93.3 5e-14 >seq168 Length=158170 Score = 127 bits (140), Expect = 2e-24 Identities = 291/438 (66%), Gaps = 0/438 (0%) Strand=Plus/Plus Query 37172 TAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGT 37231 ||| || |||||||| || | |||||||| | ||| || | ||| || ||||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGT 53045 Query 37232 TAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAA 37291 | ||| ||||| || || | || || ||||| || |||| ||||| |||||||| || Sbjct 53046 AAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAA 53105 Query 37292 GAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC 37351 ||||||||| || || || || || || || || ||| || || ||||| | | ||| Sbjct 53106 GAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATC 53165 Query 37352 AGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGC 37411 |||||||| | | ||| |||||||| || | || ||| || || || || Sbjct 53166 TGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGC 53225 Query 37412 TTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATA 37471 | |||||| | | | | ||| | |||||||| || || || | ||| Sbjct 53226 ATCAAAGAGATATTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGAATA 53285 Query 37472 CATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGA 37531 ||| || || || || || || || || || ||||| ||||| | || || | Sbjct 53286 GGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTCGGC 53345 Query 37532 TAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591 | ||| || || || ||||||||| | ||| || || || || |||||| || Sbjct 53346 AACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCAGAGGC 53405 Query 37592 TGCAAAGAAAGCAAGAAC 37609 || |||||||||||||| Sbjct 53406 AGCGAAGAAAGCAAGAAC 53423 >seq331 Length=21972 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 37217 TTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGC 37276 ||| || |||||| |||||||||||| || |||| |||||| | ||||||||| | ||| Sbjct 15720 TTCGTTCGAAAAGCATAATCCTGGCATCAATCCTCGTTTTTTCAACCAAAATATAGATGC 15661 Query 37277 AAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTA 37320 || ||| ||||| ||||| || ||||| ||||| ||||||| Sbjct 15660 GAAGGATGATGAAAAAAAAATCCCCTCAACCGCTGCGAATGCTA 15617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592230580885800