Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1364 105 5e-18 seq2477 100 2e-16 >seq1364 Length=53523 Score = 105 bits (116), Expect = 5e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 48558 ACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||| ||| || |||||||| |||||||| ||||| ||||| ||| | || | || || Sbjct 5184 ACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTC 5243 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||||||||| || || |||||||| ||||||||||| | |||| ||||| || || Sbjct 5244 CAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTG 5303 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 || || || || | | | || || | ||| ||||| | || || ||||| Sbjct 5304 GATTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTT 5363 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || || ||||||||||| Sbjct 5364 CCCGGTTAGAGTCTTCACGAAAATCTGCAT 5393 >seq2477 Length=31422 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 |||| || || ||||||||||| || || ||||| || || || | ||| | || || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 |||||| || ||||| ||||| |||||||| || | ||| | |||||||||||| || Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 48679 TCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTC 48738 |||| || || | | | || |||| ||| ||||||| || || || || | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 48739 CCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || | || || || || |||||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 ||| ||| || || ||| || ||||| || ||||| || ||| | ||| |||| || | Sbjct 19193 CCAGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGA 19134 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 |||||| || ||||| |||| ||||| || || | ||||| ||||||||||| | Sbjct 19133 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGA 19074 Query 48679 TCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTC 48738 |||| || ||| | | | ||||| | ||| || |||| ||||| || |||| Sbjct 19073 TCTTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTC 19014 Query 48739 CCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||| || || || || || ||||| Sbjct 19013 CCGTCAGGGTCTTGACGAAGATTTGCAT 18986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380883536026335