Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1314 134 2e-26 >seq1314 Length=22516 Score = 134 bits (148), Expect = 2e-26 Identities = 314/467 (67%), Gaps = 14/467 (3%) Strand=Plus/Minus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||||||||| || || |||||||||| || || ||||| | || ||||| || Sbjct 11555 CATGTCCCCAATCGCGCTGTGCATCAAGGTTCCCAAGATACAGGCACGACTGCTTGCCCA 11496 Query 47921 CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTG 47980 ||||| || || || | ||||| || || || || || || || | | Sbjct 11495 AGGAGATATCTGCAGCGGCCCTGGAGATCTTTCGCGTCACGAATGTCCTTCCGCGACGAG 11436 Query 47981 GAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGT 48040 || || ||||| || || |||||| | || || |||||||||||| ||||| |||| Sbjct 11435 GACTCTCGTGATTGAACAGGATACCATTGCACGCGAACATTCCGTATGCCTCACGGTAGT 11376 Query 48041 TCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAG 48100 | || ||||||||| | ||||| |||||| |||||||| || || |||||||| | Sbjct 11375 TGACGACGATCCAGTACGCGTAGAGCTTTGCACAGCCATAAGGGGATCGGGGATAGAATG 11316 Query 48101 GTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTT 48160 |||| || || |||| || ||||| |||||| ||||| || || || || || | Sbjct 11315 GTGTCGTTTCGCTCTGGGGGGTCTCCACCACCTTGCCATACAGCTCCGATGTCGACGCCT 11256 Query 48161 GATAGATACGAACCCTATCTTCCATCTCAAGCAA-----ACGGACTGCCTCAAGCACTCT 48215 |||||| || | | |||| || ||||| | ||||| || ||||| | | Sbjct 11255 GATAGA-ACTTGACGT-GCTTC--TC-CAAGCCACAAGTGCGGACGGCATCAAGGAGGCG 11201 Query 48216 CAGGGTGCCTATGGCATC--TGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTT 48273 || || || | | | || |||| || || || |||| ||| || || ||||| || Sbjct 11200 TAGAGTACCAAGGCCGTCAACGTCT--CCGGTGTATTCGGCCATTTCGAAAGAAACTTTG 11143 Query 48274 ACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTG 48320 || || || || || ||||| || ||||| ||||| ||||| Sbjct 11142 ACGTGCGATTGCGCGCCGAGATTGTAGATCTCGGTAGGTTGGACCTG 11096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665397528971400