Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq168 123 4e-23 >seq168 Length=158170 Score = 123 bits (136), Expect = 4e-23 Identities = 365/557 (66%), Gaps = 9/557 (2%) Strand=Plus/Plus Query 18154 TAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGT 18213 ||| ||||||||||| ||||| | |||||||| | || | |||||| ||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGT 53045 Query 18214 TAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTA-CTAGAAA 18272 | || ||||| | || | || || | ||| || || || || |||| | | ||| | Sbjct 53046 AAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGC-AAACGATCCAGAGA 53104 Query 18273 AGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATT- 18330 |||| |||||||| || ||| |||||||| | | | ||| |||| | |||| || Sbjct 53105 AGAAAATACCCTCTACAGCA-GCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTA 53163 Query 18331 GCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 || | ||||| | | ||||||||| | | || || || || |||| || Sbjct 53164 TCTGA-AATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGAT 53222 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 |||| ||| | || || | | | ||| || |||||||||||||| | | || Sbjct 53223 GGCATCAAAGAGATATTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGA 53282 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 ||| ||| ||||| ||| | ||||| || || || | ||| || | | ||||| Sbjct 53283 ATAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTC 53342 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 || | ||| | || | |||| || || | | ||||| || || ||||| |||| Sbjct 53343 GGCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCAGA 53402 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA---TT 18627 | ||||| || || | ||| | |||||||| || || || || ||| || Sbjct 53403 GGCAGCGAAGAAAGCAAGAACGTGCGAGATGAAATGACGCTCGTTGTCATTTAGACGGTT 53462 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687 | |||| || | |||||||| || || || | || |||| ||||| ||||| | || Sbjct 53463 GGTCCAGTCGTGGATATCTTTGGAGAGGTCCATCTCCTCCGCAGTCCAGAAAGACGCCTC 53522 Query 18688 GGCCTGTTTGTACATTT 18704 |||| |||||||||| Sbjct 53523 AGCCTTCTTGTACATTT 53539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731765466882000