Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1364 89.7 9e-13 >seq1364 Length=53523 Score = 89.7 bits (98), Expect = 9e-13 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || || || || | || ||| | || ||||| || || || || || || | | Sbjct 5211 AATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAACTGCTTCCCCGCGAATATCAGGCG 5270 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 |||||| ||||| || || || ||||||||||| ||||| || || || || || Sbjct 5271 CTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATTTTCGCCTTCACGTTGTCGATGGT 5330 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || || || || || || || |||||||| || |||| || || | ||| ||||| Sbjct 5331 ATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCGGTTAGAGTCTTCACGAAAATCTG 5390 Query 172067 CATT 172070 |||| Sbjct 5391 CATT 5394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905004246141000