Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq936 89.7 2e-12 seq332 84.2 6e-11 >seq936 Length=43550 Score = 89.7 bits (98), Expect = 2e-12 Identities = 98/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| |||||| ||||| ||||||||||||||||| || | ||| | Sbjct 37536 CGATGGTCATACGAGAGGGAATGGCATGAGGATTGATGATGATGTCAGGCACGATTCCTT 37477 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961 | || ||||| ||||| |||| || || ||| | | ||||||||||| || ||||| Sbjct 37476 CTGCCGTGAATGGCATGTCCTCTT-GTCGATACGTTATACCAATAGTTCCTTTCTGTCCA 37418 Query 251962 TGACGAGA 251969 || || || Sbjct 37417 TGTCGCGA 37410 >seq332 Length=22363 Score = 84.2 bits (92), Expect = 6e-11 Identities = 118/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Minus Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt--CAGTGGTGCGT 133556 ||||| || || | | || || || | ||| ||||| |||||||| || | || | | Sbjct 2088 TTTGCAACGCGCTTACTAGCATTCGCAGCAGTCGAGGGAATTTTTTTTTCA-TCGTCCTT 2030 Query 133557 TCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 | || || ||||||||| | || || || || | | || ||| | |||||||| ||| Sbjct 2029 T--GCATCAATTTTTTGGTTGAAGAAACGAGGACTGATGCCAGGATTATGTTTTTCGAAC 1972 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 || ||||| || ||||||| | |||||||||||||||||| Sbjct 1971 GAGCTTATCTCTCGGGACGAAGGACTTCACACCGAATTTGC 1931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471598002514365